Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2193 84.2 2e-11 >seq2193 Length=52601 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| ||||| |||||||| | ||| ||||||||||||||||| |||| Sbjct 25053 ACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGA 24994 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || |||| || | |||||||| || |||| ||||| || ||||| || Sbjct 24993 CAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 24934 Query 48619 CACACTTTCCTTGTCCATAATTTT 48642 | || ||||||||| |||||| Sbjct 24933 AATACCTTCCTTGTCTTGAATTTT 24910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421238210982530