Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2179 165 1e-35 >seq2179 Length=11267 Score = 165 bits (182), Expect = 1e-35 Identities = 187/248 (75%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGAT 7066 |||| ||||| || |||||||||||||| || | | | || | | ||||| || | Sbjct 6918 CATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGCGGGT 6859 Query 7067 TCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTA 7126 ||||||||| ||| | ||| | |||||| | || ||||| || |||||| |||| | Sbjct 6858 TCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCACGT 6799 Query 7127 TTTGTAATTGATCTATACCCT-GACCTTCATAATTAGTATGACAATTTATATAATTAGCT 7185 || |||||||| ||| ||| |||| ||||| ||||| ||||| |||| | ||| Sbjct 6798 CGTGCAATTGATC-ATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAGCC 6740 Query 7186 CCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTA 7245 ||||||||||||||||| || ||||||| |||||||||||||||||| ||||| | | Sbjct 6739 CCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAGTT 6680 Query 7246 AATCCTAA 7253 ||||| || Sbjct 6679 AATCCCAA 6672 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 6805 GTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTA 6864 || ||||| ||||| | || | ||||||||||| |||| ||| || || |||| ||| Sbjct 7177 GTAAATTGCTCTTTCAAGGCATCAATATGATCTAAGTAAACATGCGCGTCACCTAAAGTA 7118 Query 6865 TGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCA 6924 ||||| ||||| || | ||| || || || ||||| | | || || |||||| Sbjct 7117 TGAATGAATTCTCCACAGTCCATGTCGACGATGTGGGCAATCATCTTGGTCAACAATGCA 7058 Query 6925 TAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA 6984 |||||||| | || || || ||||| || ||||| || ||||||||||| || | Sbjct 7057 TAAGAAGCAATGTTGAATGGAACACCCAACCCCATGTCACAAGATCTTTGATACAATAAA 6998 Query 6985 CAAGATA 6991 || |||| Sbjct 6997 CAGGATA 6991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595853155548000