Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 165 1e-35
>seq2179
Length=11267
Score = 165 bits (182), Expect = 1e-35
Identities = 187/248 (75%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGAT 7066
|||| ||||| || |||||||||||||| || | | | || | | ||||| || |
Sbjct 6918 CATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGCGGGT 6859
Query 7067 TCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTA 7126
||||||||| ||| | ||| | |||||| | || ||||| || |||||| |||| |
Sbjct 6858 TCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCACGT 6799
Query 7127 TTTGTAATTGATCTATACCCT-GACCTTCATAATTAGTATGACAATTTATATAATTAGCT 7185
|| |||||||| ||| ||| |||| ||||| ||||| ||||| |||| | |||
Sbjct 6798 CGTGCAATTGATC-ATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAGCC 6740
Query 7186 CCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTA 7245
||||||||||||||||| || ||||||| |||||||||||||||||| ||||| | |
Sbjct 6739 CCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAGTT 6680
Query 7246 AATCCTAA 7253
||||| ||
Sbjct 6679 AATCCCAA 6672
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 6805 GTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTA 6864
|| ||||| ||||| | || | ||||||||||| |||| ||| || || |||| |||
Sbjct 7177 GTAAATTGCTCTTTCAAGGCATCAATATGATCTAAGTAAACATGCGCGTCACCTAAAGTA 7118
Query 6865 TGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCA 6924
||||| ||||| || | ||| || || || ||||| | | || || ||||||
Sbjct 7117 TGAATGAATTCTCCACAGTCCATGTCGACGATGTGGGCAATCATCTTGGTCAACAATGCA 7058
Query 6925 TAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA 6984
|||||||| | || || || ||||| || ||||| || ||||||||||| || |
Sbjct 7057 TAAGAAGCAATGTTGAATGGAACACCCAACCCCATGTCACAAGATCTTTGATACAATAAA 6998
Query 6985 CAAGATA 6991
|| ||||
Sbjct 6997 CAGGATA 6991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595853155548000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |