Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2181 89.7 8e-14
seq1542 82.4 1e-11
>seq2181
Length=15223
Score = 89.7 bits (98), Expect = 8e-14
Identities = 174/256 (68%), Gaps = 1/256 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| ||||| ||||| ||||||||||| | | | || |
Sbjct 14700 AGATCT-TGAGAGATAACATTCAAGGTATCACTAAGCCAGCTATTAGAAGATTAGCCAGA 14642
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| | |||| || | |||||||| || | | ||| |||||
Sbjct 14641 AGAGGTGGTGTTAAGCGTATTTCTGCTTTAATTTATGAAGAAGTTAGAGTTGTCTTGAAA 14582
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|| | | | ||||| |||||| | ||||| || ||||| || | |||
Sbjct 14581 CAATTTTTAGAAAATGTTATTAGAGATGCTGTTACTTATACTGAACACGCCAAGAGAAAG 14522
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| || ||| ||||| | || || || || || | ||||| | | | ||||||
Sbjct 14521 ACTGTTACTTCCTTGGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACCTTATATGGT 14462
Query 16688 TTTGGAAGTTAATCTT 16703
|| || |||||| ||
Sbjct 14461 TTCGGTGGTTAATTTT 14446
>seq1542
Length=1516
Score = 82.4 bits (90), Expect = 1e-11
Identities = 167/248 (67%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| || || ||||||||||| | | |||| | | ||||| |
Sbjct 1299 GAGATAACATTCAAGGTATTACTAAGCCAGCTATTAGAAGATTGGCCAGAAGAGGTGGTG 1240
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
| |||||| | || | || | |||||||| || | | ||| ||||| ||| |
Sbjct 1239 TTAAGCGTATTTCCGCTTTAATTTATGAAGAAGTTAGAGTTGTCTTGAAACAATTCTTAG 1180
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| | ||| ||| |||||| | |||||||| ||||| || | |||||||| || |
Sbjct 1179 AAAACGTCATCAGAGATGCTGTTACTTATACCGAACACGCCAAGAGAAAGACTGTTACTT 1120
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| | ||| | || || || || || | ||||| | | | || ||||| || |||
Sbjct 1119 CTTTAGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 1060
Query 16698 AATCTTCT 16705
|| || ||
Sbjct 1059 AAACTACT 1052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072886803290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |