Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2332 297 2e-75 >seq2332 Length=8947 Score = 297 bits (328), Expect = 2e-75 Identities = 611/912 (67%), Gaps = 41/912 (4%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||||||| |||||| ||||| ||||| || || || || | ||||| ||| | Sbjct 1316 TTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTT 1257 Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 |||||||||||||||||||||| | ||| | | ||| ||| ||| | | | |||| Sbjct 1256 TCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACCAAATGCAACTAAT 1197 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 |||||||| || |||||||| | |||||||||||| |||| || |||||||| | || Sbjct 1196 AATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAATAAA 1137 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424 | || || | || | || ||| | ||||| ||| || ||||||||||| || Sbjct 1136 CTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATAATC 1077 Query 21425 TTTATTA----TCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGC 21480 ||| | | || ||| | || || ||| || ||| | ||||| || Sbjct 1076 TTTTCGACAATTTCTGGATCT----GGTCTATTATTTAAATGAGCAAATAATAAACAAGC 1021 Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540 ||||||| ||| ||||||||||| |||| ||||||||||| ||||| |||||||| || Sbjct 1020 AAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACCTGG 961 Query 21541 CATT------------------------AATCCTCTCTTTTTTAACCAAAATATTGACGC 21576 ||| || ||||| || |||||||| || || || || Sbjct 960 CATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGATGC 901 Query 21577 AAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTA 21636 ||||| ||| ||||||||| || |||||||||||||| |||||||||| |||| | || Sbjct 900 AAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGCATA 841 Query 21637 TGTAGA-TTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTT-TAATACAA 21694 | ||| || |||| |||||| || |||||| | | |||||||| ||||||| Sbjct 840 T-AAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAG-CTTTTCTTCTAATACAT 783 Query 21695 TCAAT-TGTATCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNN 21753 ||| ||| |||||||| || || | | || ||| | | ||| | || Sbjct 782 GGAATATGT-TCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAAGT 724 Query 21754 NNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTA 21813 ||| |||| ||||| |||||||| ||| || || || || || Sbjct 723 ATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCATA 664 Query 21814 AAAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATT 21873 ||| || | || || | | |||||| || | |||| || | || |||||||| Sbjct 663 AAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATT 604 Query 21874 TACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTT 21933 || || |||||| || ||||| ||||| |||| || || |||| ||| | Sbjct 603 AACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCATC 544 Query 21934 ATCTGTTAATTT---TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGT 21990 ||| ||||||| | ||||||| ||||||||| |||||| | |||||||| || Sbjct 543 ATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAGT 484 Query 21991 CCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAA 22050 |||||| || || || || || | ||| || |||| |||| | |||||||| Sbjct 483 CCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAA 424 Query 22051 TATTACAAACCT 22062 || ||||| || Sbjct 423 CATAACAAATCT 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531883978637200