Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2193 104 2e-17 >seq2193 Length=52601 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || |||||||| || | ||||| | ||| | ||||| Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| || ||| ||||| ||||| || ||||| |||||| Sbjct 24886 GACACAATCGATAACGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 24945 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| || || || ||| | ||||| | ||||| | ||||| ||| Sbjct 24946 CAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAAC 25005 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| ||| | ||| | || | ||| | ||||| || Sbjct 25006 ATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 25052 Score = 95.1 bits (104), Expect = 1e-14 Identities = 176/258 (68%), Gaps = 9/258 (3%) Strand=Plus/Plus Query 26738 AAATTATATAAGTACTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGG 26797 ||||||||||| ||| || ||||| ||||| | || || || || |||||||| Sbjct 24576 AAATTATATAACTACATT-------AACAA--TGCAAATCTTCGTCAAGACTTTAACTGG 24626 Query 26798 AAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGAT 26857 || | || ||| | ||| | ||||| ||||| || || | ||||| || || Sbjct 24627 TAAGACCATTACCTTAGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCTAAAAT 24686 Query 26858 TACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACT 26917 || || ||||| || ||||| ||||||||| | | |||| | || || ||| | Sbjct 24687 CCAAGATAAGGAAGGTATTCCTCCAGATCAACAACGTTTGATTTTTGCTGGTAAGCAATT 24746 Query 26918 CGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||||| | ||||| | |||||| ||||||||||| ||||| ||| | ||| | || Sbjct 24747 GGAAGACGGTAGAACTTTATCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGT 24806 Query 26978 CCTGAGACTTAGAGGAGG 26995 | ||| | ||||| || Sbjct 24807 TTTAAGATTGAGAGGTGG 24824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478647262301600