Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 168 2e-36
seq918 168 2e-36
>seq2332
Length=8947
Score = 168 bits (186), Expect = 2e-36
Identities = 540/831 (65%), Gaps = 56/831 (7%)
Strand=Plus/Plus
Query 22217 TAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCAT 22276
|||||||||||||| | | || ||||| ||| ||| ||| || | |||||| ||
Sbjct 572 TAGCATTCTTTGCTGCATCTGATGGTATTGTTAATGAAAATTTAATTGAAAATTTTTCAG 631
Query 22277 CTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATG 22336
| ||| ||||| || || || | || || |||||| | ||||| ||||||||||||
Sbjct 632 CAGAAGTTCAAATTCCTGAAGCTAAATCATTTTATGGTTTCCAAATTATGATTGAAAATA 691
Query 22337 TTCACGCGGAAACATATTC---TATGAT-GCTACAGTCACTCGTAGAAGATAAAGACGAA 22392
|||| | ||||| ||||| | | || | ||| | | | || | ||| | | |||
Sbjct 692 TTCATTCAGAAACTTATTCCCTTTTAATTGATAC--TTA-TATTA-AGGATCCAAAGGAA 747
Query 22393 CAACGAAACTTATTCCGCGCGATTCGCACC-ATTCAATCAATTAAGAATAAGGCAGATTG 22451
||||||| || ||| | || |||| || |||| | || || |||||
Sbjct 748 GCTGATTACTTATTTAATGCTATT-GAACATATTCCATGTATTAGAAGAAAAGCTGATTG 806
Query 22452 GGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508
||| | | |||||| | | | ||| | || || ||| | | |||| |||||
Sbjct 807 GGCATTAAGATGGATTACTGATACTGAGGTCTTATATGCTGAAAGATTAGTTGCCTTTGC 866
Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568
|| |||||||| ||||||||| |||| ||||| | || || ||| |||| ||| |
Sbjct 867 TGCCGTTGAAGGTATTTTCTTTAGTGGATCATTTGCATCTATTTTCTGGTTAAAGAAAAG 926
Query 22569 --------TGCAATT----------------ATGCCGGGTCTAACGTTTTCAAATGAGTT 22604
||| ||||| ||| |||| ||||||||||| ||
Sbjct 927 AGGTTTGATGCNNNNNNNNNNNNNNNNNNNNATGCCAGGTTTAACTTTTTCAAATGAATT 986
Query 22605 AATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATAT 22664
|||| | ||||||| ||| | ||||| |||||||| ||| | ||| | |||| |
Sbjct 987 AATTTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATTTGC---TCATTT 1043
Query 22665 CATTCATAAACT---TCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACT 22721
| | ||| || |||| |||| ||| | |||||| | |||||||| |
Sbjct 1044 AAATAATAGACCAGATCCA---GAAATTGTCGAAAAGATTATTGTTGAAGCAGTTGATAT 1100
Query 22722 TGAAC--GTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAA 22779
|||| | ||||| || | || |||||||| ||| | | ||||| || ||
Sbjct 1101 TGAAAAGGAATATTTCACTG--ATGCATTACCAGTTAGTTTATTAGGTATGAACAGTAAA 1158
Query 22780 TCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCA 22839
| ||| || |||| || |||||||||| ||| | ||||| || || | ||| ||
Sbjct 1159 TTGATGTGTCAATATGTTGAATTTGTTGCCGATAGATTATTAGTTGCATTTGGTAATAAG 1218
Query 22840 AAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAG 22899
|| ||||| || ||||||||||| | |||||| ||||||| | | || ||
Sbjct 1219 AAAGTCTATAATGTTCAAAATCCATTTGATTTTATGGAAAATATTTCATTAGCTGGTAAA 1278
Query 22900 ACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATGCATTG 22959
|| || || || ||||| |||||| ||| || ||||| || |||||||||| | |
Sbjct 1279 ACTAACTTTTTTGAAAAGAGAGTTTCTGATTATCAAAAGGCTGGTGTTATGGCTAAACAT 1338
Query 22960 AATGA------TAGTTCAAAACACGGATTTACATTAGATGAAGAATTTTAA 23004
||||| |||||| || || | ||| | || |||||||| || |||
Sbjct 1339 AATGAACCAACTAGTTCTAACCATGACTTTTCCTTTGATGAAGATTTCTAA 1389
>seq918
Length=18345
Score = 168 bits (186), Expect = 2e-36
Identities = 1138/1812 (63%), Gaps = 72/1812 (4%)
Strand=Plus/Minus
Query 363097 TATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACTTATCTG 363156
||| |||||||||| || || | |||| || | |||| |||||||| | || ||
Sbjct 10969 TATCATGGTGTTACCACCGTCGAATTAGATAACTTAGCCGCTGAAACTGCTGCCTACATG 10910
Query 363157 ACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCTCTTCAT 363216
|||| | ||||| ||||| ||| | |||||| | ||||| || || | | |||
Sbjct 10909 ACCACTATTCATCCAGATTATGCCATTTTAGCTGCTAGAATTGCCGTATCCAATTTACAT 10850
Query 363217 AAAATGAC-ATCAAATAAGTTT-TCCAGT--GTCATGGATAGTCTGTATAACTATGTCAA 363272
||| || | |||| || || || ||| || | | || | ||| | ||||| ||
Sbjct 10849 AAACAAACTACCAAACAATATTCTCAAGTTAGTAAAGAAT----TATATGATTATGTTAA 10794
Query 363273 TACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGTTC 363332
| ||||||| ||| || || | ||| || | || | | ||| ||| ||
Sbjct 10793 CCCCAAGACCGATAAACATTCTCCTATGATTTCCAAGGAGACTTATGATATTATTTGTGA 10734
Query 363333 TAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGATATTTT 363392
|||| || | || || | || |||||| ||| || | ||| || |||
Sbjct 10733 ACATGCCGATGAATTAAATTCAGCAATTGTTTATGATCGTGATTTCAACTATAATTATTT 10674
Query 363393 CGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACG 363452
||| | ||||| |||| | ||| || ||| | | |||||| | ||| |||| |
Sbjct 10673 CGGGTTCAAGACTTTGGAAAGATCTTATTTATTAAGAGTTAATGGTAAAGTTGCTGAAAG 10614
Query 363453 CCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGC 363512
|| || ||| | | ||| | || || |||||||| ||| | ||| || || |
Sbjct 10613 ACCACAACATTTAATCATGAGAGTGGCCATTGGTATTCATGGTAATGAT----ATCCCTC 10558
Query 363513 GA----TTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCCACGCCA 363564
|| ||||| | ||||| | | || | | || | ||||| || | | |||
Sbjct 10557 GAGTTATTGAATCTTATAATATGAT--GT-CACAAAAGTTT-TTCACTCATGGTTCACCA 10502
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAAT 363623
|| | | ||||| || |||| | |||||| |||||||| || |||||| | ||
Sbjct 10501 ACTTTATTTAATGCCGGTACTCCAAGTCCACAAATGTCTTCATG-TTTCTTAGTTGCTAT 10443
Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683
||| || ||||| || || || |||| ||| || | || | ||||||| | ||||| ||
Sbjct 10442 GAAAGATGATTCAATTGATGGGATCTATGATACTTTGAAAACTTGTGCTTTGATTTCAAA 10383
Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATT 363741
|| ||| || || |||||| || || || ||| ||||| | || | || || |||
Sbjct 10382 GAGTGCTGGTGGTATTGGTTTACATATTCATAATATTCGTTCTACTGGGGCA--TATATT 10325
Query 363742 CGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800
||| || || |||| | || || | | |||||| | ||||| || | || ||
Sbjct 10324 GCCGGTACCAACGG-TACTTCCAACGGTATTATCCCCATGGTACGTGTTTTCAATAACAC 10266
Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860
|| | || || || || ||||| ||| | ||| || ||||| | ||| | ||
Sbjct 10265 CGCCCGTTATGTTGATCAAGGTGGTAATAAGAGACCAGGAGCATTTGCCCTTTATTTAGA 10206
Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920
|| ||| | ||||||||||| ||| |||| | | ||||| || ||||| ||
Sbjct 10205 ACCATGGCATTCAGATATTTTTGATTTTATTGATATTAGAAAAAATCAAGGTAAAGAAGA 10146
Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980
| | | || | ||| | ||| ||| | ||| || |||| ||||||||| | ||
Sbjct 10145 AATTAGAGCCAGAGATTTATTCCCAGCATTATGGATTCCTGATTTATTTATGAAGAGAGT 10086
Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040
||| | | ||||| || | |||| ||| | ||| ||| || | | |||||
Sbjct 10085 GGAACAAAATGGTGATTGGACATTATTTTCCCCTAATGAAGCTCCTGGGTTACCTGATGT 10026
Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100
| ||||| || | || |||| ||||| |||||| || || | | | |
Sbjct 10025 TTATGGTGATGAATTTGAACAATTATATGAAAAATATGAACGTGAAGGTCGTGGTAGACA 9966
Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160
|| ||| ||||| || |||||| | ||||| |||| | || | ||| || || ||
Sbjct 9965 AACCATTAAGGCACAAAAATTATGGTATTCCATCTTGGAAGCCCAAACTGAAACTGGTAC 9906
Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|| | |||||| || |||||| | || |||| ||| |||| || || | | ||||
Sbjct 9905 TCCATTTATGTTATATAAAGATGCTTGTAACCAAAAGACCAATCAAAAGAATTTAGGTAT 9846
Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280
||| | ||| ||||| || ||| ||||||| | | || || || |||
Sbjct 9845 TATTAAATCATCCAATTTATGTTGTGAAATTGTTGAATATTCATCACCTGAAGAAGTTGC 9786
Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGATG---------- 364327
|| |||||| | || || || || | || | ||||| ||||||||
Sbjct 9785 TGTTTGTAACTTAGCTTCAATTGCCTTACCATCATTTGTTGAAAAAGATGATGATCATTC 9726
Query 364328 -----GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCT 364382
|| |||||| | || | |||| | ||| | || |||| | ||| |
Sbjct 9725 ATGGTATAATTTTGATAA-----AT-TACATGAAATTACCAAGATTGTTACTCGTAATTT 9672
Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442
| || ||||| || || ||||||||| |||| |||||| | ||| || |||
Sbjct 9671 AAATAAAGTTATTGATCGTAACTATTATCCAGTTCCAGAAGCCAAAACTTCCAACATGAA 9612
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC-TCAAGA 364501
|| | || |||| | || ||||| || | ||||| | || ||| || | ||||
Sbjct 9611 AAATAGACCAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCATTCATG--GCATTAAGA 9554
Query 364502 -TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTAT 364560
| |||||||||| | || || | | |||||| | ||||||||||| || |||
Sbjct 9553 TTACCATTTGATTCTCAAGAAGCCAGAGAATTAAATATTCAAATCTTTGAAACTATTTAT 9494
Query 364561 TTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAG-GGAAAGTACTCTA---- 364615
||| || || |||| ||| || || ||||| ||| || || ||
Sbjct 9493 CATGCTGCCGTGGAAACTTCTATTGAATTAGC-----CCAAGAAGAAGGTCCT-TATGAA 9440
Query 364616 -CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674
||||| || || ||| || ||||| ||| || | |||| |||||||| |
Sbjct 9439 TCTTATCCAGGTTCACCTGCATCTCAGGGTTTATTACAATATGATTTATGGAATAGAAAA 9380
Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734
||| ||| |||| | |||||||| || ||| | || ||||| |
Sbjct 9379 CCAACTGAATTATGGGATTGGGATACCTTAAAGCAAAACATGGCAAAACATGGATTAAGA 9320
Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794
|| || || | || || ||||| || ||||| || |||| ||| | || || ||
Sbjct 9319 AATTCTCTTTTAGTTGCCCCTATGCCAACTGCTTCAACATCACAAATCTTAGGTAATAAT 9260
Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854
|| || |||||||| | ||| || |||||||| | | |||||| | || |||||
Sbjct 9259 GAATGTTTCGAACCATATACTTCAAACATTTATTCAAGAAGAGTTCTTGCTGGTGAATTC 9200
Query 364855 CCGGTAGTTAAT 364866
| | ||||||
Sbjct 9199 CAAATTGTTAAT 9188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303311350978460
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