Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2332 168 2e-36 seq918 168 2e-36 >seq2332 Length=8947 Score = 168 bits (186), Expect = 2e-36 Identities = 540/831 (65%), Gaps = 56/831 (7%) Strand=Plus/Plus Query 22217 TAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCAT 22276 |||||||||||||| | | || ||||| ||| ||| ||| || | |||||| || Sbjct 572 TAGCATTCTTTGCTGCATCTGATGGTATTGTTAATGAAAATTTAATTGAAAATTTTTCAG 631 Query 22277 CTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATG 22336 | ||| ||||| || || || | || || |||||| | ||||| |||||||||||| Sbjct 632 CAGAAGTTCAAATTCCTGAAGCTAAATCATTTTATGGTTTCCAAATTATGATTGAAAATA 691 Query 22337 TTCACGCGGAAACATATTC---TATGAT-GCTACAGTCACTCGTAGAAGATAAAGACGAA 22392 |||| | ||||| ||||| | | || | ||| | | | || | ||| | | ||| Sbjct 692 TTCATTCAGAAACTTATTCCCTTTTAATTGATAC--TTA-TATTA-AGGATCCAAAGGAA 747 Query 22393 CAACGAAACTTATTCCGCGCGATTCGCACC-ATTCAATCAATTAAGAATAAGGCAGATTG 22451 ||||||| || ||| | || |||| || |||| | || || ||||| Sbjct 748 GCTGATTACTTATTTAATGCTATT-GAACATATTCCATGTATTAGAAGAAAAGCTGATTG 806 Query 22452 GGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| | | |||||| | | | ||| | || || ||| | | |||| ||||| Sbjct 807 GGCATTAAGATGGATTACTGATACTGAGGTCTTATATGCTGAAAGATTAGTTGCCTTTGC 866 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || |||||||| ||||||||| |||| ||||| | || || ||| |||| ||| | Sbjct 867 TGCCGTTGAAGGTATTTTCTTTAGTGGATCATTTGCATCTATTTTCTGGTTAAAGAAAAG 926 Query 22569 --------TGCAATT----------------ATGCCGGGTCTAACGTTTTCAAATGAGTT 22604 ||| ||||| ||| |||| ||||||||||| || Sbjct 927 AGGTTTGATGCNNNNNNNNNNNNNNNNNNNNATGCCAGGTTTAACTTTTTCAAATGAATT 986 Query 22605 AATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATAT 22664 |||| | ||||||| ||| | ||||| |||||||| ||| | ||| | |||| | Sbjct 987 AATTTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATTTGC---TCATTT 1043 Query 22665 CATTCATAAACT---TCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACT 22721 | | ||| || |||| |||| ||| | |||||| | |||||||| | Sbjct 1044 AAATAATAGACCAGATCCA---GAAATTGTCGAAAAGATTATTGTTGAAGCAGTTGATAT 1100 Query 22722 TGAAC--GTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAA 22779 |||| | ||||| || | || |||||||| ||| | | ||||| || || Sbjct 1101 TGAAAAGGAATATTTCACTG--ATGCATTACCAGTTAGTTTATTAGGTATGAACAGTAAA 1158 Query 22780 TCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCA 22839 | ||| || |||| || |||||||||| ||| | ||||| || || | ||| || Sbjct 1159 TTGATGTGTCAATATGTTGAATTTGTTGCCGATAGATTATTAGTTGCATTTGGTAATAAG 1218 Query 22840 AAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAG 22899 || ||||| || ||||||||||| | |||||| ||||||| | | || || Sbjct 1219 AAAGTCTATAATGTTCAAAATCCATTTGATTTTATGGAAAATATTTCATTAGCTGGTAAA 1278 Query 22900 ACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATGCATTG 22959 || || || || ||||| |||||| ||| || ||||| || |||||||||| | | Sbjct 1279 ACTAACTTTTTTGAAAAGAGAGTTTCTGATTATCAAAAGGCTGGTGTTATGGCTAAACAT 1338 Query 22960 AATGA------TAGTTCAAAACACGGATTTACATTAGATGAAGAATTTTAA 23004 ||||| |||||| || || | ||| | || |||||||| || ||| Sbjct 1339 AATGAACCAACTAGTTCTAACCATGACTTTTCCTTTGATGAAGATTTCTAA 1389 >seq918 Length=18345 Score = 168 bits (186), Expect = 2e-36 Identities = 1138/1812 (63%), Gaps = 72/1812 (4%) Strand=Plus/Minus Query 363097 TATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACTTATCTG 363156 ||| |||||||||| || || | |||| || | |||| |||||||| | || || Sbjct 10969 TATCATGGTGTTACCACCGTCGAATTAGATAACTTAGCCGCTGAAACTGCTGCCTACATG 10910 Query 363157 ACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCTCTTCAT 363216 |||| | ||||| ||||| ||| | |||||| | ||||| || || | | ||| Sbjct 10909 ACCACTATTCATCCAGATTATGCCATTTTAGCTGCTAGAATTGCCGTATCCAATTTACAT 10850 Query 363217 AAAATGAC-ATCAAATAAGTTT-TCCAGT--GTCATGGATAGTCTGTATAACTATGTCAA 363272 ||| || | |||| || || || ||| || | | || | ||| | ||||| || Sbjct 10849 AAACAAACTACCAAACAATATTCTCAAGTTAGTAAAGAAT----TATATGATTATGTTAA 10794 Query 363273 TACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGTTC 363332 | ||||||| ||| || || | ||| || | || | | ||| ||| || Sbjct 10793 CCCCAAGACCGATAAACATTCTCCTATGATTTCCAAGGAGACTTATGATATTATTTGTGA 10734 Query 363333 TAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGATATTTT 363392 |||| || | || || | || |||||| ||| || | ||| || ||| Sbjct 10733 ACATGCCGATGAATTAAATTCAGCAATTGTTTATGATCGTGATTTCAACTATAATTATTT 10674 Query 363393 CGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACG 363452 ||| | ||||| |||| | ||| || ||| | | |||||| | ||| |||| | Sbjct 10673 CGGGTTCAAGACTTTGGAAAGATCTTATTTATTAAGAGTTAATGGTAAAGTTGCTGAAAG 10614 Query 363453 CCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGC 363512 || || ||| | | ||| | || || |||||||| ||| | ||| || || | Sbjct 10613 ACCACAACATTTAATCATGAGAGTGGCCATTGGTATTCATGGTAATGAT----ATCCCTC 10558 Query 363513 GA----TTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCCACGCCA 363564 || ||||| | ||||| | | || | | || | ||||| || | | ||| Sbjct 10557 GAGTTATTGAATCTTATAATATGAT--GT-CACAAAAGTTT-TTCACTCATGGTTCACCA 10502 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAAT 363623 || | | ||||| || |||| | |||||| |||||||| || |||||| | || Sbjct 10501 ACTTTATTTAATGCCGGTACTCCAAGTCCACAAATGTCTTCATG-TTTCTTAGTTGCTAT 10443 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 ||| || ||||| || || || |||| ||| || | || | ||||||| | ||||| || Sbjct 10442 GAAAGATGATTCAATTGATGGGATCTATGATACTTTGAAAACTTGTGCTTTGATTTCAAA 10383 Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATT 363741 || ||| || || |||||| || || || ||| ||||| | || | || || ||| Sbjct 10382 GAGTGCTGGTGGTATTGGTTTACATATTCATAATATTCGTTCTACTGGGGCA--TATATT 10325 Query 363742 CGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || || |||| | || || | | |||||| | ||||| || | || || Sbjct 10324 GCCGGTACCAACGG-TACTTCCAACGGTATTATCCCCATGGTACGTGTTTTCAATAACAC 10266 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | || || || || ||||| ||| | ||| || ||||| | ||| | || Sbjct 10265 CGCCCGTTATGTTGATCAAGGTGGTAATAAGAGACCAGGAGCATTTGCCCTTTATTTAGA 10206 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 || ||| | ||||||||||| ||| |||| | | ||||| || ||||| || Sbjct 10205 ACCATGGCATTCAGATATTTTTGATTTTATTGATATTAGAAAAAATCAAGGTAAAGAAGA 10146 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | | | || | ||| | ||| ||| | ||| || |||| ||||||||| | || Sbjct 10145 AATTAGAGCCAGAGATTTATTCCCAGCATTATGGATTCCTGATTTATTTATGAAGAGAGT 10086 Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 ||| | | ||||| || | |||| ||| | ||| ||| || | | ||||| Sbjct 10085 GGAACAAAATGGTGATTGGACATTATTTTCCCCTAATGAAGCTCCTGGGTTACCTGATGT 10026 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | ||||| || | || |||| ||||| |||||| || || | | | | Sbjct 10025 TTATGGTGATGAATTTGAACAATTATATGAAAAATATGAACGTGAAGGTCGTGGTAGACA 9966 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 || ||| ||||| || |||||| | ||||| |||| | || | ||| || || || Sbjct 9965 AACCATTAAGGCACAAAAATTATGGTATTCCATCTTGGAAGCCCAAACTGAAACTGGTAC 9906 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 || | |||||| || |||||| | || |||| ||| |||| || || | | |||| Sbjct 9905 TCCATTTATGTTATATAAAGATGCTTGTAACCAAAAGACCAATCAAAAGAATTTAGGTAT 9846 Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280 ||| | ||| ||||| || ||| ||||||| | | || || || ||| Sbjct 9845 TATTAAATCATCCAATTTATGTTGTGAAATTGTTGAATATTCATCACCTGAAGAAGTTGC 9786 Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGATG---------- 364327 || |||||| | || || || || | || | ||||| |||||||| Sbjct 9785 TGTTTGTAACTTAGCTTCAATTGCCTTACCATCATTTGTTGAAAAAGATGATGATCATTC 9726 Query 364328 -----GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCT 364382 || |||||| | || | |||| | ||| | || |||| | ||| | Sbjct 9725 ATGGTATAATTTTGATAA-----AT-TACATGAAATTACCAAGATTGTTACTCGTAATTT 9672 Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442 | || ||||| || || ||||||||| |||| |||||| | ||| || ||| Sbjct 9671 AAATAAAGTTATTGATCGTAACTATTATCCAGTTCCAGAAGCCAAAACTTCCAACATGAA 9612 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC-TCAAGA 364501 || | || |||| | || ||||| || | ||||| | || ||| || | |||| Sbjct 9611 AAATAGACCAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCATTCATG--GCATTAAGA 9554 Query 364502 -TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTAT 364560 | |||||||||| | || || | | |||||| | ||||||||||| || ||| Sbjct 9553 TTACCATTTGATTCTCAAGAAGCCAGAGAATTAAATATTCAAATCTTTGAAACTATTTAT 9494 Query 364561 TTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAG-GGAAAGTACTCTA---- 364615 ||| || || |||| ||| || || ||||| ||| || || || Sbjct 9493 CATGCTGCCGTGGAAACTTCTATTGAATTAGC-----CCAAGAAGAAGGTCCT-TATGAA 9440 Query 364616 -CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 ||||| || || ||| || ||||| ||| || | |||| |||||||| | Sbjct 9439 TCTTATCCAGGTTCACCTGCATCTCAGGGTTTATTACAATATGATTTATGGAATAGAAAA 9380 Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 ||| ||| |||| | |||||||| || ||| | || ||||| | Sbjct 9379 CCAACTGAATTATGGGATTGGGATACCTTAAAGCAAAACATGGCAAAACATGGATTAAGA 9320 Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794 || || || | || || ||||| || ||||| || |||| ||| | || || || Sbjct 9319 AATTCTCTTTTAGTTGCCCCTATGCCAACTGCTTCAACATCACAAATCTTAGGTAATAAT 9260 Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854 || || |||||||| | ||| || |||||||| | | |||||| | || ||||| Sbjct 9259 GAATGTTTCGAACCATATACTTCAAACATTTATTCAAGAAGAGTTCTTGCTGGTGAATTC 9200 Query 364855 CCGGTAGTTAAT 364866 | | |||||| Sbjct 9199 CAAATTGTTAAT 9188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303311350978460