Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 114 1e-20
>seq2193
Length=52601
Score = 114 bits (126), Expect = 1e-20
Identities = 181/259 (70%), Gaps = 9/259 (3%)
Strand=Plus/Plus
Query 23959 CAAATTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTG 24018
|||||||||||| ||| || ||||| ||||| | || || || || |||||||
Sbjct 24575 CAAATTATATAACTACATT-------AACAA--TGCAAATCTTCGTCAAGACTTTAACTG 24625
Query 24019 GAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGA 24078
| || | |||||| | ||||| || | ||||| || || | ||||| || |
Sbjct 24626 GTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCTAAAA 24685
Query 24079 TTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAAC 24138
| || || ||||| || ||||| |||||||| | |||||| | || ||||||
Sbjct 24686 TCCAAGATAAGGAAGGTATTCCTCCAGATCAACAACGTTTGATTTTTGCTGGTAAGCAAT 24745
Query 24139 TCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAG 24198
| ||||| | |||| | ||| || ||||||||||| ||||| || | |||||||
Sbjct 24746 TGGAAGACGGTAGAACTTTATCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAG 24805
Query 24199 TGTTAAGATTGAGAGGAGG 24217
| |||||||||||||| ||
Sbjct 24806 TTTTAAGATTGAGAGGTGG 24824
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || |||||||| || | || || | ||||| || |
Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || ||| || ||| ||||| ||||| || ||||| ||||||
Sbjct 24886 GACACAATCGATAACGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 24945
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||||| || || |||||| | ||||| | |||| | || || |||
Sbjct 24946 CAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAAC 25005
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||| || | |||||||| |||||||||||||| ||
Sbjct 25006 ATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 25052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429922743192150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |