Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2193 114 1e-20 >seq2193 Length=52601 Score = 114 bits (126), Expect = 1e-20 Identities = 181/259 (70%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 23959 CAAATTATATAAGTACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTG 24018 |||||||||||| ||| || ||||| ||||| | || || || || ||||||| Sbjct 24575 CAAATTATATAACTACATT-------AACAA--TGCAAATCTTCGTCAAGACTTTAACTG 24625 Query 24019 GAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGA 24078 | || | |||||| | ||||| || | ||||| || || | ||||| || | Sbjct 24626 GTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCTAAAA 24685 Query 24079 TTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAAC 24138 | || || ||||| || ||||| |||||||| | |||||| | || |||||| Sbjct 24686 TCCAAGATAAGGAAGGTATTCCTCCAGATCAACAACGTTTGATTTTTGCTGGTAAGCAAT 24745 Query 24139 TCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAG 24198 | ||||| | |||| | ||| || ||||||||||| ||||| || | ||||||| Sbjct 24746 TGGAAGACGGTAGAACTTTATCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAG 24805 Query 24199 TGTTAAGATTGAGAGGAGG 24217 | |||||||||||||| || Sbjct 24806 TTTTAAGATTGAGAGGTGG 24824 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || |||||||| || | || || | ||||| || | Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || ||| || ||| ||||| ||||| || ||||| |||||| Sbjct 24886 GACACAATCGATAACGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 24945 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||||| || || |||||| | ||||| | |||| | || || ||| Sbjct 24946 CAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAAC 25005 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | |||||||| |||||||||||||| || Sbjct 25006 ATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 25052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429922743192150