Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 102 7e-17
seq2023 91.5 1e-13
>seq2193
Length=52601
Score = 102 bits (112), Expect = 7e-17
Identities = 165/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338
||||| ||||||||| || ||||| || | || || || ||||||||| | ||| ||
Sbjct 24591 ATTAACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGA 24650
Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397
|| |||||| ||| |||| || || ||||| ||||| ||||| | ||
Sbjct 24651 ATCTTCTGACACTATTG-ACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTC 24709
Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457
||||| ||| | | |||| ||| || || ||||| ||||| | | ||| | |||
Sbjct 24710 CAGATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCG 24769
Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| || ||||||||||| || || ||| ||||| | || || |||||| |||| ||
Sbjct 24770 ACTACAACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24824
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| ||||| || | || || || ||||||||| | ||| || ||
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| || ||||| || || ||||| || || ||||| | || |||||
Sbjct 25114 GACACTATT-GACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCA 25172
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | | |||| || || || ||||| ||||| | | ||| | ||||||| ||
Sbjct 25173 ACAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAA 25232
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| ||||| || |||||| ||||| | || |||||||| |||| ||
Sbjct 25233 CATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 25280
>seq2023
Length=11923
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
||||||||||||||| ||||| || | || || || || |||||| | ||| || ||
Sbjct 3910 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 3969
Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400
|||||| || ||||| || ||| || || || || ||||| | || ||
Sbjct 3970 TTCTGACACTATT-GACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTG 4028
Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460
| || |||||| | || | ||| || || ||||||||||||| | ||| | | || |
Sbjct 4029 ACCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACT 4088
Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| ||||| ||||| || ||||| |||| | || || ||||| |||| ||
Sbjct 4089 ACAACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 4140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425330884783600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |