Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 149 5e-31
seq2023 131 1e-25
>seq2193
Length=52601
Score = 149 bits (164), Expect = 5e-31
Identities = 174/233 (75%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|||||||||||| || || |||||||| || ||||| |||| || | ||||| || ||
Sbjct 24594 AACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATC 24653
Query 25055 GTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
||||||||||| || || || ||| |||||| || || ||||| ||||| ||
Sbjct 24654 TTCTGACACTATTGA--CAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCA 24711
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
|| ||||| || | |||||||| || || ||||| ||||| | | | ||| | |||
Sbjct 24712 GATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGAC 24771
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| |||||||| |||||||| |||||||||| |||| | ||||| ||
Sbjct 24772 TACAACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24824
Score = 147 bits (162), Expect = 2e-30
Identities = 172/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || || ||||| ||||||| | ||||| || || |||
Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885
Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| | || | || | |||| ||| ||||| ||||| ||||| || || |
Sbjct 24886 GACACAATCGA-TAACGTTAAATCTAAAATTCAA-GACAAGGAAGGTATTCCTCCAGATC 24943
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | ||||| || || || ||||||||||| | | | ||| || || ||||
Sbjct 24944 AACAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACA 25003
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| |||||||| |||||||||| |||| | ||||| ||
Sbjct 25004 ACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 25052
Score = 132 bits (146), Expect = 4e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || || ||||| |||| || | ||||| || || |||
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| ||||| ||||| ||||| || || |
Sbjct 25114 GACACTATTGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATC 25171
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | ||||| || || || ||||| ||||| | | | ||| | ||||||||
Sbjct 25172 AACAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACA 25231
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || |||||||||| | || ||||||| ||
Sbjct 25232 ACATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 25280
>seq2023
Length=11923
Score = 131 bits (144), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|| ||||||||| || || ||||| || || ||||| | || || | ||||| || ||
Sbjct 3910 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 3969
Query 25055 GTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
||||||||||| || || || || || ||| ||||| ||||| |||||||||
Sbjct 3970 TTCTGACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCT 4027
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
|||||||| | | || ||||| || || ||||||||||||| | | ||| | ||
Sbjct 4028 GACCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 4087
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || ||||| ||||| || |||| ||||| |||| ||||||| ||
Sbjct 4088 TACAACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 4140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433314638601950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |