Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2332 250 3e-61 >seq2332 Length=8947 Score = 250 bits (276), Expect = 3e-61 Identities = 541/809 (67%), Gaps = 39/809 (5%) Strand=Plus/Minus Query 92918 AATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 ||||||||||| || |||||||| | || ||| ||||||| | || ||||| |||| Sbjct 1199 AATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAAT 1140 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 | || || |||| || || || || | || || || || |||| ||||| ||| Sbjct 1139 AAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAA-CAAT 1081 Query 93038 ATTTCTATTACTCTACTATTTGGTGGTTTTTGT--ACGACATAATTGTACAT----TAAG 93091 | | || || | || |||| ||| | | || | | ||| || || ||| Sbjct 1080 AAT-CTTTT---CGACAATTTC-TGGATCTGGTCTATTATTTAAATGAGCAAATAATAAA 1026 Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| || |||||||||||||| |||| | || || ||||| || |||||| Sbjct 1025 CAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAA 966 Query 93152 CCTGGTAA------------------------CAGTCCTCGTTTCTTGAGCCAAAATATT 93187 ||||| | || |||| |||||| | ||| || || Sbjct 965 CCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATA 906 Query 93188 GAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCG 93247 || ||||| ||| ||| || |||||||| ||||| ||||| || || | | ||| Sbjct 905 GATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCA 846 Query 93248 GCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATA 93307 ||| | | | || | |||||| |||| |||||||| |||||| | ||||| Sbjct 845 GCATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATA 786 Query 93308 CAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTAT 93367 || || | ||| ||||| ||||||| |||||| || | | ||| || || Sbjct 785 CATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAA 726 Query 93368 GTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCG 93427 ||||| ||||| || ||||| |||| ||||| | ||| || || ||||||||| || Sbjct 725 GTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCA 666 Query 93428 TAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCA 93487 || || || ||||||| | || || |||||| ||||| | || | | ||||||| Sbjct 665 TAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCA 606 Query 93488 TTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCA 93547 || || |||||||| ||||| ||||| || || |||| | || || | | | ||| Sbjct 605 TTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCA 546 Query 93548 TCATCTTTAAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACA 93604 ||||| || | ||||| |||||| || |||||| | ||| | |||||| || Sbjct 545 TCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCA 486 Query 93605 GTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGA 93664 |||||||| |||||||||||||| ||||| | | ||| || || |||||| ||||||| Sbjct 485 GTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGA 426 Query 93665 AATATGACAAAACGATTAGGGTTATCTTT 93693 || || ||||| | | ||| || || || Sbjct 425 AACATAACAAATCTACGAGGATTTTCCTT 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843189277200