Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 250 3e-61
>seq2332
Length=8947
Score = 250 bits (276), Expect = 3e-61
Identities = 541/809 (67%), Gaps = 39/809 (5%)
Strand=Plus/Minus
Query 92918 AATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977
||||||||||| || |||||||| | || ||| ||||||| | || ||||| ||||
Sbjct 1199 AATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAAT 1140
Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037
| || || |||| || || || || | || || || || |||| ||||| |||
Sbjct 1139 AAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAA-CAAT 1081
Query 93038 ATTTCTATTACTCTACTATTTGGTGGTTTTTGT--ACGACATAATTGTACAT----TAAG 93091
| | || || | || |||| ||| | | || | | ||| || || |||
Sbjct 1080 AAT-CTTTT---CGACAATTTC-TGGATCTGGTCTATTATTTAAATGAGCAAATAATAAA 1026
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||| || |||||||||||||| |||| | || || ||||| || ||||||
Sbjct 1025 CAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAA 966
Query 93152 CCTGGTAA------------------------CAGTCCTCGTTTCTTGAGCCAAAATATT 93187
||||| | || |||| |||||| | ||| || ||
Sbjct 965 CCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATA 906
Query 93188 GAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCG 93247
|| ||||| ||| ||| || |||||||| ||||| ||||| || || | | |||
Sbjct 905 GATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCA 846
Query 93248 GCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATA 93307
||| | | | || | |||||| |||| |||||||| |||||| | |||||
Sbjct 845 GCATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATA 786
Query 93308 CAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTAT 93367
|| || | ||| ||||| ||||||| |||||| || | | ||| || ||
Sbjct 785 CATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAA 726
Query 93368 GTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCG 93427
||||| ||||| || ||||| |||| ||||| | ||| || || ||||||||| ||
Sbjct 725 GTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCA 666
Query 93428 TAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCA 93487
|| || || ||||||| | || || |||||| ||||| | || | | |||||||
Sbjct 665 TAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCA 606
Query 93488 TTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCA 93547
|| || |||||||| ||||| ||||| || || |||| | || || | | | |||
Sbjct 605 TTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCA 546
Query 93548 TCATCTTTAAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACA 93604
||||| || | ||||| |||||| || |||||| | ||| | |||||| ||
Sbjct 545 TCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCA 486
Query 93605 GTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGA 93664
|||||||| |||||||||||||| ||||| | | ||| || || |||||| |||||||
Sbjct 485 GTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGA 426
Query 93665 AATATGACAAAACGATTAGGGTTATCTTT 93693
|| || ||||| | | ||| || || ||
Sbjct 425 AACATAACAAATCTACGAGGATTTTCCTT 397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556843189277200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |