Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 104 2e-17
seq2023 87.8 2e-12
>seq2193
Length=52601
Score = 104 bits (114), Expect = 2e-17
Identities = 164/234 (70%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||||||||| ||||| || | || || || ||||||||| | ||| ||| |
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || ||||| ||||| ||||| |||| ||||||
Sbjct 25114 GACACTATTGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCAA 25173
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | | |||| || || || ||||||||||| || |||| | ||||||| ||
Sbjct 25174 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAAC 25233
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAA 111419
|| ||||| |||||||| |||||||||| ||| | | | ||||| ||||||
Sbjct 25234 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGGTCAATAA 25287
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 111181 TTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAA 111240
|||| ||||||||| || ||||| || | || || || ||||||||| | ||| |||
Sbjct 24592 TTAACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAA 24651
Query 111241 CCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC 111300
| || || ||| | | || || ||||| || || ||||| ||||
Sbjct 24652 TCTTCTGACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCA 24711
Query 111301 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 111360
||||||||| | | |||| ||| || || ||||||||||| || |||| | ||||
Sbjct 24712 GATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGAC 24771
Query 111361 TATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398
|| || || ||||| ||||| || |||||||||| ||
Sbjct 24772 TACAACATTCAAAAGGAATCCACTTTACATTTAGTTTT 24809
>seq2023
Length=11923
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242
||||||||||||||| ||||| || | || || || || |||||| | ||| ||| |
Sbjct 3910 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 3969
Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302
|| || ||| | | || ||| || || ||||| ||||| |||| ||
Sbjct 3970 TTCTGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4029
Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362
|||||||| | || | ||| || || ||||| |||||| || |||| | | || ||
Sbjct 4030 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 4089
Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398
|| || ||||| |||||||| |||| ||||| ||
Sbjct 4090 CAACATCCAAAAGGAATCTACCTTACACTTAGTCTT 4125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423026955826000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |