Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2023 168 1e-36
seq2193 154 3e-32
>seq2023
Length=11923
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || ||||||| || || || ||||||||||| || || || | || || ||||||
Sbjct 4125 AAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCT 4066
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| ||||| || || || || | |||||||||||| |||||||| ||||||||||||
Sbjct 4065 TCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 4006
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | ||||| || || ||||| | ||||| ||||| ||||| || ||
Sbjct 4005 TGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTC 3946
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | |||||||||||| || ||||||
Sbjct 3945 TTACCAGTTAAGGTCTTGACGAAAATTTGCATT 3913
>seq2193
Length=52601
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| || || || ||||||||||| |||||||| | || || || ||
Sbjct 25266 CAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGATAAAGTTCTACCGTC 25207
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | | |||||| || || ||||| |||||||||||
Sbjct 25206 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTC 25147
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | |||||| || || ||||| | ||||| ||||| ||||| |||||
Sbjct 25146 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGT 25087
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||||||| || |||||
Sbjct 25086 CTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Score = 152 bits (168), Expect = 9e-32
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || || |||| ||||| || ||||| ||||| || || || | || || || |||
Sbjct 25037 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCT 24978
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| ||||| || ||||| || | | |||||| || || ||||| ||||||||||||
Sbjct 24977 TCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 24918
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
||||| || | || ||| ||||| ||||| | ||||| ||||| || ||||||||
Sbjct 24917 TGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTC 24858
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||||||| || |||||
Sbjct 24857 TTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
Score = 136 bits (150), Expect = 7e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || || |||| ||||| || ||||| ||||| || ||||| | || || || |||
Sbjct 24809 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCGTCT 24750
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || || || || | | |||||| || || ||||| |||||||| |||
Sbjct 24749 TCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCT 24690
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| || || | |||||| || || ||||| | ||||| ||||| ||||| |||||
Sbjct 24689 TGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTC 24630
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | ||||||||||| || ||||||
Sbjct 24629 TTACCAGTTAAAGTCTTGACGAAGATTTGCATT 24597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921593253691600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |