Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2193 114 1e-20 >seq2193 Length=52601 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || |||||| |||||||||| |||||||| ||||| |||||||||||| Sbjct 25281 ACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGA 25222 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| | | ||||| | ||| ||||||||| | || | ||| ||||| || ||||| Sbjct 25221 TAAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 25162 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| || || || | | |||| ||||| | ||||| || Sbjct 25161 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25102 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || || || | || || || ||||| ||||| Sbjct 25101 TTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| ||||||||||||| || ||||| |||||||||||||| || Sbjct 25055 ATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCA 24996 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | | ||||| | ||| ||||||||| | || | ||| ||||| || ||| Sbjct 24995 GACAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGA 24936 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| ||||| ||| ||| | |||| | | || | ||||| | ||||| Sbjct 24935 GGAATACCTTCCTTGTCTTGAAT-TTTAGATTTAACGTTATCGATTGTGTCAGAAGATTC 24877 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || | || || || ||||| ||||| Sbjct 24876 AACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826 Score = 102 bits (112), Expect = 7e-17 Identities = 166/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| ||||||||||||| || ||||| |||||||||||||| ||| Sbjct 24827 ATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCG 24768 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | | ||||| | ||| |||||||| | || | ||| ||||| || ||| Sbjct 24767 GATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGA 24708 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || || || || | | |||| ||||| | ||||| Sbjct 24707 GGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCA 24648 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAAT 114390 || || | ||| | || || || || | ||| || || || || ||||| | ||||| Sbjct 24647 ACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATTG-TTAAT 24591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420121445418360