Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 118 1e-21
seq2023 95.1 1e-14
seq2332 86.0 6e-12
>seq2193
Length=52601
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || |||||||||||||| || |||||| | ||| ||
Sbjct 25268 CTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGATAAAGTTCTACCG 25209
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || ||| | ||||| ||||| || || || ||||| ||||| ||
Sbjct 25208 TCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTG 25149
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| |||| || | ||||| ||||| || ||||| | ||||
Sbjct 25148 TCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATG 25089
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || || |||||||||||
Sbjct 25088 GTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || |||| ||| | || ||||||||||| || || || ||| | ||| ||
Sbjct 24812 CTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCG 24753
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||| ||||| || || || ||||| ||||| |||
Sbjct 24752 TCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTA 24693
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| |||| || | ||||| ||||| || ||||| | ||||
Sbjct 24692 TCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATG 24633
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || || ||||||||
Sbjct 24632 GTCTTACCAGTTAAAGTCTTGACGAAGATTTGCAT 24598
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || |||| ||| | || ||||||||||| || || || || | ||| ||
Sbjct 25040 CTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCG 24981
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || ||| | ||||| ||||| || || || ||||| ||||| ||
Sbjct 24980 TCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTG 24921
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||| | || | || | ||||| ||||| || ||||| | ||| |
Sbjct 24920 TCTTGAATTTTAGATTTAA-CGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGAT 24862
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || || |||||||||||
Sbjct 24861 GGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
>seq2023
Length=11923
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || |||| || | || |||||||||||||| || || || | ||| || |
Sbjct 4128 CTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCA 4069
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || || | || |||| ||| ||||| || ||||| ||||| ||
Sbjct 4068 TCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 4009
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || ||||| || | ||||| ||||| || ||||| | ||||
Sbjct 4008 TCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATA 3949
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || || |||||||||||
Sbjct 3948 GTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 3914
>seq2332
Length=8947
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/209 (70%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 138105 TCaaaaaaaTTAGTTTTACCCTCCATGGATATGTTAGTCATAAAATTAAAAGGATTACTC 138164
|||||||| ||||||||||| | | || || || |||||||| ||| ||||| |
Sbjct 1292 TCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTTTCCATAAAATCAAATGGATTT-TG 1234
Query 138165 GCCATAAAATGCTTTGGCTGATTA--AGAT-CGACAAGCAAACGATCGGCTACAAATTCA 138221
||| | | |||| || |||| | || | || | || | |||||| |||||||||
Sbjct 1233 AACATTATAGACTTT--CTTATTACCAAATGCAACTAATAATCTATCGGCAACAAATTCA 1176
Query 138222 ATGTATCGACACATCGATTCGGTGTTCATGCCCAACAAACTGCAAGGCAACGCCGTTTTA 138281
| ||| |||||||| ||| ||||||| || || ||||| || || || |
Sbjct 1175 ACATATTGACACATCAATTTACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTG 1116
Query 138282 AAAAATTCCTTTTCAATTTCTACCGCTTC 138310
||| ||||||||||||| || || |||||
Sbjct 1115 AAATATTCCTTTTCAATATCAACTGCTTC 1087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451988905398800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |