Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 104 6e-17
seq2023 89.7 1e-12
>seq2193
Length=52601
Score = 104 bits (114), Expect = 6e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| || |||||||| | ||||||||||| |||||| || || ||||| | ||||| ||
Sbjct 25023 AGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCTTCTAATTGCTTACC 24964
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
||||| || | ||| || || || ||| ||| ||||| || ||||| || ||
Sbjct 24963 AGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGATTT 24904
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| |||| ||||| | | ||| || || || ||||| |||||||| || | ||
Sbjct 24903 AACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGT 24844
Query 199612 TTTCACAAAAATTTG 199626
|| || ||||||||
Sbjct 24843 CTTGACGAAAATTTG 24829
>seq2023
Length=11923
Score = 89.7 bits (98), Expect = 1e-12
Identities = 157/228 (69%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| | ||| | ||| | || || |||||||||| ||||||||||| ||||| || ||
Sbjct 4129 TCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 4070
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| | | || ||||| || ||| |||||
Sbjct 4069 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 4010
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| || || || | ||||| | | ||| || || || || ||
Sbjct 4009 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAAT 3950
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTT 199641
|||||||| || | || || || |||||||| |||||| | |||
Sbjct 3949 AGTCTTACCAGTTAAGGTCTTGACGAAAATTTG---CATTTTTGGCTT 3905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178883384519510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |