Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq918 129 7e-25
seq2231 105 8e-18
seq2175 84.2 3e-11
seq330 84.2 3e-11
>seq918
Length=18345
Score = 129 bits (142), Expect = 7e-25
Identities = 464/713 (65%), Gaps = 22/713 (3%)
Strand=Plus/Minus
Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358
||||| || |||||||| |||| |||| | || ||||| || ||||||||||||| |||
Sbjct 9922 CAAACTGAAACTGGTACTCCATTTATGTTATATAAAGATGCTTGTAACCAAAAGACCAAT 9863
Query 112359 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACA 112418
||||||||||| ||| | || || ||||| | ||| ||||| | |||| | ||
Sbjct 9862 CAAAAGAATTTAGGTATTATTAAATCATCCAATTTATGTTGTGAAATTGTTGAATATTCA 9803
Query 112419 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 112478
|| || ||||| |||||| | || ||||| || | || | ||| ||
Sbjct 9802 TCACCTGAAGAAGTTGCTGTTTGTAACTTAGCTTCAATTGCCTTACCATCATTTGTTGA- 9744
Query 112479 CCAGAGACAAAGA-CATT-------TGATTATGAAAAACTCCACGAAGTTACGAAAACTG 112530
| ||| | || |||| | ||| ||| ||| | || ||| |||| || | ||
Sbjct 9743 -AAAAGATGATGATCATTCATGGTATAATTTTGATAAATTACATGAAATTACCAAGATTG 9685
Query 112531 TCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGT 112589
| || || |||| | |||||||||| | || | ||| || ||| ||| ||
Sbjct 9684 TTACTCGTAATTTAAATAAAGTTATTGATCGTAACTATTATCCAGTTCCAGA-AGCCAAA 9626
Query 112590 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTC 112649
| || || |||| | | | ||||||| | || || |||||| | || |||| ||||
Sbjct 9625 ACTTCCAACATGAAAAATAGACCAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCATTC 9566
Query 112650 AT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708
|| | || || |||||||||| | ||||| | ||| | ||| | || ||
Sbjct 9565 ATGGCATTAAGATTAC-CATTTGATTCTCAAGAAGCCAGAGAATTAAATATTCAAATCTT 9507
Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768
||| || || ||||| || || | || | | || || || | | || |||||
Sbjct 9506 TGAAACTATTTATCATGCTGCCGTGGAAACTTCTATTGAATTAGCCCAAGAAGAAGGTCC 9447
Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGA 112828
|||||| | | | ||||| || || || || || | | |||| |||| | | |||
Sbjct 9446 TTATGAATCTTATCCAGGTTCACCTGCATCTCAGGGTTTATTACAATATGATTTAT-GGA 9388
Query 112829 AGGTGAGACCAAGCTTCACTA--CGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGA 112884
| | ||||| || | || || ||||| | | ||| || ||| ||| |
Sbjct 9387 ATAGAAAACCAA-CTGAATTATGGGATTGGGATACCTTAAAGCAAAACATGGCAA--AAC 9331
Query 112885 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 112944
| || | | || |||||| | || || |||||||| || || || |||||||||
Sbjct 9330 ATGGATTAAGAAATTCTCTTTTAGTTGCCCCTATGCCAACTGCTTCAACATCACAAATCT 9271
Query 112945 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 112997
| |||||||||||||| || ||||| || || | ||||| ||| ||||||
Sbjct 9270 TAGGTAATAATGAATGTTTCGAACCATATACTTCAAACATTTATTCAAGAAGA 9218
>seq2231
Length=145420
Score = 105 bits (116), Expect = 8e-18
Identities = 219/328 (67%), Gaps = 15/328 (5%)
Strand=Plus/Minus
Query 15970 TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCG 16029
||||||||||||||||||| ||||| || || | ||| || || ||||| || |
Sbjct 126533 TATCAAAACCATCCATCTCAACTAAAAGTTGATTCAAAGTGGTCTCACGCTCATCGTTAG 126474
Query 16030 CTGGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAA 16080
| ||||| ||| ||| || |||| || | ||||||||||||||||
Sbjct 126473 C------ACCACTTGCATTGCCTTTCGCACGCAGCTTCCCAATCGCATCAATCTCATCAA 126420
Query 16081 TGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGG 16140
||||| || | || |||||| ||||| || || | || |||||||| |
Sbjct 126419 CAAAGACAATTGAAGGAGCATTTTCACGAGCAGTTTTGAATAAGTCACGTACACGAGATG 126360
Query 16141 CGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACAT 16200
| |||||||| |||||||| || ||||| | | | ||| | ||| || ||
Sbjct 126359 CACCCACACCCACAAACATTTCTACAAATTCAGAACCAGAAACAGAAAAGAAAGGTACCC 126300
Query 16201 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 16260
| |||||| ||| |||| | ||| |||||||||||||| || ||||| ||||| |
Sbjct 126299 CTGCTTCACCAGCAGTGGCCCTGGCAAGAAGAGTCTTACCAGTTCCTGGAGGACCCGAAA 126240
Query 16261 GGAGGGCACCTCGTGGAATCTTGGCGCC 16288
| | || |||| || || || || ||
Sbjct 126239 GAATTGCCCCTCTAGGGATTTTCGCACC 126212
>seq2175
Length=31899
Score = 84.2 bits (92), Expect = 3e-11
Identities = 267/407 (66%), Gaps = 8/407 (2%)
Strand=Plus/Plus
Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946
|||||| | ||||| | ||| | ||| | || | |||||| ||||| || | ||
Sbjct 19342 ATCAAATCTTCCTGGTCTAAGCAACGCCTTGTCCAAAATATCAGGACGATTAGTACCTGC 19401
Query 15947 GATGACAACAATACCTGTTT--CGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004
| ||||||| | || | | ||||||||||||||| || ||| | |||||
Sbjct 19402 CAAAACAACAACA--TGATCACCCGAATCAAAACCATCCATTTCAACCAACAATTGGTTC 19459
Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064
| || | ||| ||||| ||||| || || | ||| || | || | || | |
Sbjct 19460 AATGTATTTTCACGTTCGTCATTTCCTCCAATTCTTCCATTACCTCTTTCTCTACCAATG 19519
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAG 16123
|||||||| ||||||| ||| | ||| | || |||| ||||| | ||| || ||
Sbjct 19520 GCATCAATTTCATCAACGAATATAATGGAAGGAGCCATTTCACGAGCTGTCTTGAATAAG 19579
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182
|| || ||||| || || || || |||||||| ||||| || | || |||| ||
Sbjct 19580 -TCACGAACACGAGAAGCACCAACCCCTACAAACATTTCCACGAATTCTGAACCGGAGAC 19638
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| | | || || ||| | |||||| || ||||| || | ||| || ||||| |
Sbjct 19639 ACT-CAAAAATGGAACACCTGCTTCACCAGCTGTGGCTTTTGCCAAAAGTGTTTTACCAG 19697
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289
|||| || ||| | | | ||||||| ||||| ||||| |||
Sbjct 19698 TACCAGGTGGACCAGATAAAATTGCACCTCTAGGAATTTTGGCTCCA 19744
>seq330
Length=28712
Score = 84.2 bits (92), Expect = 3e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
|||| ||||| | | || ||||| || || ||| ||||||||||||||||| ||
Sbjct 5848 TGGATGGCTATATTAGAATCCCAAACTGAAACGGGTGGTCCATATATGCTTTACAAGGAT 5907
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|| ||||| |||| |||||||| |||||||| || || ||| ||||||| | |||
Sbjct 5908 GCTTGTAATAAAAAATCAAATCAAAAAAATTTGGGCGTCATAAAGTCTTCCAACTTATGT 5967
Query 112398 ACAGAAATCTTGGA 112411
|||||| ||||
Sbjct 5968 TGTGAAATCATGGA 5981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620722769021600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |