Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq918 154 2e-32
seq2231 98.7 1e-15
seq1950 98.7 1e-15
>seq918
Length=18345
Score = 154 bits (170), Expect = 2e-32
Identities = 466/710 (66%), Gaps = 16/710 (2%)
Strand=Plus/Plus
Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984
|||||| ||| ||||| | || || ||||| || |||||||||||||| ||||||||
Sbjct 9218 TCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCATTATTACCTAAGATTTG 9277
Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTT 106044
|| || || || |||||||| || || | |||||| || | | || | || ||
Sbjct 9278 TGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTTCTTAATCCATGTT--TT 9335
Query 106045 G--ATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACA 106100
| ||| || ||| | |||||| || || || || ||||||| |||| | |
Sbjct 9336 GCCATGTTTTGCTTTAAGGTATCCCAATCCCATAATTCAG-TTGGTTTTCTATTCC-ATA 9393
Query 106101 TATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTT 106160
|||| |||| | | || || || | || ||||| | | | ||||| | |||||
Sbjct 9394 AATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAAGATTCATAAGGACCTT 9453
Query 106161 GGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATAC 106220
||| || |||||| | |||| || || ||||| || |||||||||||
Sbjct 9454 CTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAAATAGTTTCAAAGATTT 9513
Query 106221 GAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACAT 106280
|| ||| | || ||||||| | |||||||||| | | | || ||| |||
Sbjct 9514 GAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGGTAATCTTAATGCCATGAATGCAT 9573
Query 106281 CCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAG 106340
| || | |||||| || ||||| |||| ||||| | | ||| || || || ||
Sbjct 9574 CAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCATGTTGGAAGTTTTGGCT- 9632
Query 106341 TCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 106399
||| ||| |||||| | || | ||||| ||| |||| ||| |||||||||||
Sbjct 9633 TCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATTACGAGTAACAATCTTG 9692
Query 106400 GTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACATAC 106453
|| |||||||| | ||| ||| ||| || | || || |||| | ||| |
Sbjct 9693 GTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATCATCTTTTTCAACAAAT 9752
Query 106454 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 106513
||| | ||| ||||| || || || |||||||| || || || || ||
Sbjct 9753 GATGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCTTCAGGTGATGAATATTCA 9812
Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573
| |||||| ||| || ||||| ||||| | || ||||||||||| || |||||
Sbjct 9813 ACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAATTCTTTTGATTGGTCTTT 9872
Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623
| ||| || ||||| || || | ||| | || || || || || || ||
Sbjct 9873 TGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTTG 9922
>seq2231
Length=145420
Score = 98.7 bits (108), Expect = 1e-15
Identities = 199/297 (67%), Gaps = 15/297 (5%)
Strand=Plus/Minus
Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336
||||||||||||||||||| |||||||| || | ||| || || ||||| || |
Sbjct 126533 TATCAAAACCATCCATCTCAACTAAAAGTTGATTCAAAGTGGTCTCACGCTCATCGTTAG 126474
Query 9337 CTGGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAA 9387
| ||||| ||| ||| || |||| || | ||||||||||||||||
Sbjct 126473 C------ACCACTTGCATTGCCTTTCGCACGCAGCTTCCCAATCGCATCAATCTCATCAA 126420
Query 9388 TGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGG 9447
|||||||| | || |||||| || || ||| || | || || || | |
Sbjct 126419 CAAAGACAATTGAAGGAGCATTTTCACGAGCAGTTTTGAATAAGTCACGTACACGAGATG 126360
Query 9448 CGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACAT 9507
| |||||||| |||||||| || ||||| | | | ||| | ||| || ||
Sbjct 126359 CACCCACACCCACAAACATTTCTACAAATTCAGAACCAGAAACAGAAAAGAAAGGTACCC 126300
Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCG 9564
| |||||| ||| |||| | ||| |||||||||||||| || ||||| |||||
Sbjct 126299 CTGCTTCACCAGCAGTGGCCCTGGCAAGAAGAGTCTTACCAGTTCCTGGAGGACCCG 126243
>seq1950
Length=3064
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
||||| |||||||| || || || || | ||||| |||||||||||| ||||||
Sbjct 500 TATGGCCGTGTTGCTCCTCGTTCTGGATTAGCTGTCAAGCATGGTATTTCTACTGGTGCT 559
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163
|| ||||||||| | || |||| ||||||||| ||||| || | || ||||| | ||
Sbjct 560 GGAGTTATTGATGCTGATTATAGAGGTGAAGTTAAAGTTGTATTATTTAATCATAGTGAT 619
Query 155164 AAAGACTTTGAGGTAAA 155180
||||| ||||| || ||
Sbjct 620 AAAGATTTTGAAGTTAA 636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589962141857200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |