Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1908 98.7 1e-15 >seq1908 Length=4876 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATATG 154930 |||||||| || || |||||||| ||||| |||||||| || | | | | | ||| Sbjct 2625 ATTATGATCACTTATCCATCTACTTATGGTTTATTTGAACCTGGTGTCAAAGAAGCTATT 2566 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 || || |||||| ||| |||||| || ||||||||||| || ||| | ||||| || Sbjct 2565 GAA-ATTGTTCATTCCAACGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCA 2507 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 || || || || ||| |||| | ||||| ||||| |||||| | || | || || Sbjct 2506 AGTTGGTTTAACATCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATCCACAA 2447 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 155086 || || | || | ||||| ||||| ||||| || Sbjct 2446 GACTTTTGCTCTTTCCCATGGTGGTGGTGGTCCAGG 2411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579194482395200