Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1908 116 4e-21 >seq1908 Length=4876 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATG 159605 |||||||| || ||||||||||| ||||| |||||||| | ||| | | | ||| Sbjct 2625 ATTATGATCACTTATCCATCTACTTATGGTTTATTTGAACCTGGTGTCAAAGAAGCTATT 2566 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 || ||||||||| || |||||| || |||||||||||||| ||| | ||||| || Sbjct 2565 GAA-ATTGTTCATTCCAACGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCA 2507 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 || ||| || || ||| |||| | ||||| ||||| |||||| | || | || || Sbjct 2506 AGTTGGTTTAACATCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATCCACAA 2447 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 159761 ||| || | || | ||||| ||||| ||||| || Sbjct 2446 GACTTTTGCTCTTTCCCATGGTGGTGGTGGTCCAGG 2411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588032602880800