Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 168 1e-36
>seq2193
Length=52601
Score = 168 bits (186), Expect = 1e-36
Identities = 171/223 (77%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| ||||| | || | |||||| || |||||||| ||||| |||| | |||
Sbjct 24819 TCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGT 24760
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || || || | |||||||| ||||||||||| ||
Sbjct 24759 TCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACC 24700
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||| ||||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 24699 TTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAA 24640
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| ||||| || || ||||| || ||||| | |||||||
Sbjct 24639 GGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATT 24597
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | ||| || || ||||| || |||||||||| | |||
Sbjct 25275 TCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGATAAAGT 25216
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| ||||| || | |||||||| ||||||||||| ||
Sbjct 25215 TCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACC 25156
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| ||||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 25155 TTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAA 25096
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || || || || ||||| | ||||||
Sbjct 25095 GGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| ||||| | || | |||||| || |||||||| ||||| || | | |||
Sbjct 25047 TCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGT 24988
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| ||||| || | |||||||| ||||||||||| ||
Sbjct 24987 TCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACC 24928
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| || ||||| || || ||||| ||| ||| ||||| |
Sbjct 24927 TTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAA 24868
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || || || || ||||| | ||||||
Sbjct 24867 AGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109445635460510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |