Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq2179 136 5e-27 seq330 89.7 7e-13 >seq2179 Length=11267 Score = 136 bits (150), Expect = 5e-27 Identities = 211/296 (71%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 104903 AACTTGTTAAATGAAATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTA 104962 || ||||||| ||||| ||||| || | ||| | | ||||||||| ||| | | ||| Sbjct 6606 AAATTGTTAAGTGAAAAAGGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTG 6665 Query 104963 GATTCTTGTGGATTTCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCA 105021 || || ||||| ||| ||| ||||||||||||||| ||| |||||||||| || Sbjct 6666 GACAATTTGGGATTA-ACTGATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCA 6724 Query 105022 ATGGAGACATGCTGGAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGG-TA 105080 |||||||||| ||| ||| | |||| || |||||||| || |||||||| ||||| || Sbjct 6725 ATGGAGACATTTTGGGGCTGAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATA 6784 Query 105081 TAGACCAATTAAGTCAAGTTATAGAAACTATAAAAAATAACCCCGGGTGTCGAAGAATAA 105140 | || ||||| | || ||| ||| | || | ||||| | ||||||| | Sbjct 6785 T-GATCAATTGCACGACGTGATAAAAAAATTGAAGACAAACCCTTACGATAGAAGAATTA 6843 Query 105141 TTATAGATAGTTGGAATGTGTCACAATTATCAGATATGGCTCTTCCACCGTGTCAT 105196 |||| | |||||| | | | || || | |||||||||||||| |||||| Sbjct 6844 TTATGTCTGCTTGGAACCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCAT 6899 >seq330 Length=28712 Score = 89.7 bits (98), Expect = 7e-13 Identities = 172/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 126945 ATTTTTATAGGTCCAACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCAT 127004 ||||| | ||||||| || ||||| | || ||||||||| ||||||||||| Sbjct 12254 ATTTTCTTTGGTCCAATTTATTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAC 12313 Query 127005 GCTAGA---AGTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCC 127061 || ||| || | || |||| | || |||| | ||||||| | ||| | || Sbjct 12314 GCAAGAGCAAG--AGGGCCAAG-AGCAGTATTAACCAGACAACCAACCGAAGGTAGATCA 12370 Query 127062 CAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCC 127121 || |||||| || ||||| ||||||||||||| ||||||| || | | |||| || Sbjct 12371 AGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATCGCATATGGTGCG 12430 Query 127122 ACACAATTTTTAAATGAAAGAATGTTTTTATGTTCAGATCCTTTTCAAATTGATGTGTGT 127181 | ||||| ||| |||||| | | ||| || ||| | ||| || ||||| | ||| Sbjct 12431 TCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTGT 12490 Query 127182 ACAAATTGTGG 127192 | || ||||| Sbjct 12491 AATAAATGTGG 12501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658382377998800