Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq918 598 5e-166
seq2332 443 2e-119
seq330 179 4e-40
>seq918
Length=18345
Score = 598 bits (662), Expect = 5e-166
Identities = 1512/2285 (66%), Gaps = 81/2285 (4%)
Strand=Plus/Plus
Query 46971 TCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATA 47030
||||| || | |||||| | ||| | | | || | || |||| |||||| |||||
Sbjct 8838 TCTTTATCAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATC 8897
Query 47031 CCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTA 47090
|| ||||| || || |||| || |||||||||||||| || |||||| |
Sbjct 8898 CCGGTCTTCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTT 8957
Query 47091 GGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCT 47150
|| ||| |||||| ||||| | ||||||| |||||||||||||| |||||||||||
Sbjct 8958 GGATCTTTAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCT 9017
Query 47151 GCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATG 47210
|||||||| | ||| |||| | || ||||||||||| ||||| | ||||||
Sbjct 9018 GCCATATCAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATC 9077
Query 47211 TCTTCTGGGAGATTAG-TATT--TTGAATAGATCCTCCgttttctataattttgtttttt 47267
|| |||||| |||| || ||||||||| || ||| ||||| | ||||
Sbjct 9078 TCAGCTGGGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTA 9137
Query 47268 aat---tcatttga-----ccaaagttttcgttcagttaatgtttttaaAAGATGAGGAT 47319
| | ||||| | ||||| || || ||| | || | |||| ||||
Sbjct 9138 ACTGCTTCATTCCAAATACCCAAA----TCAACCA---AATCTCTTAATAAGAAT-GGAT 9189
Query 47320 TAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTT 47379
|||||||||| ||||| |||| || ||||| | ||| || || ||||||||||
Sbjct 9190 TAACAATTTGGAATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTT 9249
Query 47380 CTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTA 47439
| | | |||||||||| || || ||||| | ||||| || || ||||| | |||||||
Sbjct 9250 CGAAACATTCATTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTA 9309
Query 47440 ATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAA 47499
| | |||||||| ||||| |||| || | | ||||||||| |
Sbjct 9310 AAAGAGAATTTCTTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATCCCAATCCCATA 9369
Query 47500 GATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAAC 47559
|| | ||| |||||| ||||||||||| | | || | | | || ||||
Sbjct 9370 ATTCAGTTGGTTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAAC 9429
Query 47560 CATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCAC 47619
| ||| | || ||||||||| | | || || | |||| | | ||||| |||
Sbjct 9430 CTGGATAAGATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAG 9489
Query 47620 TATAATATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCTTCTGATGATTCAAAA 47678
|| ||| || |||||||| |||| || |||| |||| || |||||| || |||||
Sbjct 9490 CATGATAAATAGTTTCAAAGATTTGAATATTTA-ATTCTCTGGCTTCTTGAGAATCAAAT 9548
Query 47679 GGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTA 47738
|| | |||| ||| ||||| ||||| || || | |||||||||||
Sbjct 9549 GGTAATCTTAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTA 9608
Query 47739 TGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTA 47798
| | | || ||| | |||||||| | |||||| | ||| ||| |||| ||||
Sbjct 9609 TTTTTCATGTTGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTA 9668
Query 47799 TTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACT----- 47853
|||| | |||||| |||||||| ||||| | ||
Sbjct 9669 TTTAAATTACGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAA 9728
Query 47854 ------TGTTATTTAT-AACAAACC-TATTAAGTGCTATAGATGCTAGATTACATACAGC 47905
| | ||| | |||||| | |||| || || || |||| ||||| |||||
Sbjct 9729 TGATCATCATCTTTTTCAACAAATGATGGTAAG-GCAATTGAAGCTAAGTTACAAACAGC 9787
Query 47906 TACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGT 47965
|| || | || | ||||| | |||||| ||||| ||| |||| ||| |
Sbjct 9788 AACTTCTTCAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAAT 9847
Query 47966 ACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGT 48025
||| ||||| | ||||| | | |||||| || || || || | |||||| || ||
Sbjct 9848 ACCTAAATTCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGT 9907
Query 48026 TCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGC 48085
|||||||| | || | ||| | ||| || | ||| | | ||||| ||
Sbjct 9908 ACCAGTTTCAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAATGGTTTG 9967
Query 48086 TCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACAC 48145
|||| | | ||| |||| ||||| |||||| | ||||||||||| ||||| ||
Sbjct 9968 TCTACCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAAC 10027
Query 48146 ATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTAC 48205
|| | |||||||||| ||||||||| | | |||| |||||| ||| | || ||
Sbjct 10028 ATCAGGTAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCAC 10087
Query 48206 TCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTC 48265
||| ||||||||| ||| || ||||| | ||| |||||||| || | ||| | |||
Sbjct 10088 TCTCTTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTC 10147
Query 48266 TTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTC 48325
||| || || ||| || ||| |||| ||| || | ||||| | ||||||||||||
Sbjct 10148 TTCTTTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTC 10207
Query 48326 TAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGT 48385
|||||| | || | | | ||||||| |||||||| |||||||| | ||| | ||| ||
Sbjct 10208 TAAATAAAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGT 10267
Query 48386 ATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAAT 48445
|| || |||| | || ||| |||| |||||| || || |||| ||||| || | |||
Sbjct 10268 GTTATTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAAT 10327
Query 48446 ATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAG 48504
||| ||| ||| | |||||| ||| || || ||| |||||||| || | || |
Sbjct 10328 ATATGCCCCAGTAGAACGAATATTATGAATATGTAA-ACCAATACCACCAGCACTCTTTG 10386
Query 48505 ATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATAT 48564
| || | |||||| ||| | |||||||| || || || || ||||||| |||||
Sbjct 10387 AAATCAAAGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAG 10446
Query 48565 TTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAG 48624
| || ||||| ||||||||| ||| ||| || | ||||||||| ||||| |
Sbjct 10447 CAACTAAGAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTG 10506
Query 48625 ATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATAT 48684
| ||||| | || | || | ||| | || ||||| | ||||||||| | ||||
Sbjct 10507 AACCATGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAGGGATAT 10566
Query 48685 CCCATT--GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAAT 48742
|||| ||| ||||| || | || | ||| | | || ||| ||||||||| |||
Sbjct 10567 --CATTACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAAC 10624
Query 48743 TTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802
||| ||| | | | || | ||| ||| ||||||| || || || || ||||| || ||
Sbjct 10625 TTTACCATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATA 10684
Query 48803 --TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACT 48860
||||| || ||||| || ||||| |||||||| | || ||||| | | |
Sbjct 10685 GTTGAAA--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATA 10742
Query 48861 ACATCCATTACATTTTTTG---AT-ATA----ATTGATT-----CCTT---GTAAAGATC 48904
| || ||| | | ||| || ||| | || || ||| || || ||
Sbjct 10743 ATAT-CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATA 10801
Query 48905 TTC-TACAA--CATCACTA-------AATAtttttt--ttGTTTCTTTATGAAGATTAGA 48952
|| || || | | |||| |||||| ||| | |||| |||||| | ||| ||
Sbjct 10802 ATCATATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGA 10861
Query 48953 TATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA-CTAG 49011
|| | |||||||||||||| || ||||||||||||||||| || || |||||| ||
Sbjct 10862 TACGGCAATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAG 10920
Query 49012 ATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAA 49071
|||| || ||||| |||||||||| || || ||||| ||| | |||| ||
Sbjct 10921 CAGTTTCAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCTGAAA 10980
Query 49072 T--AACTTTCATTGCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAA 49129
| |||| | || || || | ||| | ||||| | ||| | ||| ||||||||
Sbjct 10981 TGGTTCTTTGAGTG--ATGGCGACGGCATCAACATGATTCGGATCTAATCCGTAACATAA 11038
Query 49130 tttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTT 49189
| ||| | ||||| || |||||||| || | || || ||||| || || | |||
Sbjct 11039 TCTTTGAACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTC-TTT 11097
Query 49190 TATAA 49194
|||||
Sbjct 11098 TATAA 11102
>seq2332
Length=8947
Score = 443 bits (490), Expect = 2e-119
Identities = 665/937 (71%), Gaps = 37/937 (4%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
|||||||| || | |||||| |||||||| || |||||||| || ||||||| ||| |
Sbjct 1316 TTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTT 1257
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||||||||||||||||| |||||||| | ||| || || ||| | | || |
Sbjct 1256 TCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACCAAATGCAACTAAT 1197
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| |||||| || ||||||| || |||| ||||| | || ||||| |||| |||
Sbjct 1196 AATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAATAAA 1137
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|||| |||| |||||| || | | |||| | ||| |||| ||||| || |||||
Sbjct 1136 CTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATAATC 1077
Query 18910 GATACAACTCTATCTTCATTAGGAGGGT-ATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| | || | ||| || || | || || ||| ||| | ||||| |||||
Sbjct 1076 TTTTCGACAATTTCTGGATCTGGTCTATTATTTAA-ATGAGCAAATAATAAACAAGCAAA 1018
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
|||| ||||| || || ||||||| || |||||||| ||||| |||||||| |||||
Sbjct 1017 ATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACCTGGCAT 958
Query 19029 ------------------------CAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064
|| |||||||| ||||||||||| ||||| |||||
Sbjct 957 NNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGATGCAAA 898
Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124
||||||| |||||| |||||||| || || ||||| ||||||| |||||| ||||
Sbjct 897 TGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGCATATAA 838
Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCAT 19184
| ||| ||| | ||||||| | | |||||||||||| || || | | |||||| ||
Sbjct 837 GACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATACATGGAAT 778
Query 19185 -TGTCTCTATAGAATTAAATAGATACATACGCT-CATCTGTATCTTTAACATATGCATCT 19242
||| || |||| |||||||| || || ||| | | || ||| |||| ||| | |||
Sbjct 777 ATGT-TCAATAGCATTAAATAAGTA-ATCAGCTTCCTTTGGATCCTTAATATAAGTATCA 720
Query 19243 ATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAA 19302
|| || | || ||||||||||||||||||| || || || || || |||||
Sbjct 719 ATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCATAAAAT 660
Query 19303 CATCTTGCTTCTGTTATCTGTACTTCA-CTACAAAATCTTTCGACCAAATTTTCATTAAC 19361
|| | ||||| | || || ||||| || ||||| |||| | ||||||||||||||
Sbjct 659 GATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAAT-TTTCAATTAAATTTTCATTAAC 601
Query 19362 TATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGA 19421
|| |||||| || ||||| ||||||||||| | ||| || | | |||||||
Sbjct 600 AATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCATCATC 541
Query 19422 GGTTAATGTAT---TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCA 19478
||||| ||| ||||||||| | ||||||| |||||| | ||||||| | |||||
Sbjct 540 ATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAGTCCA 481
Query 19479 AAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538
||| || || |||||||| || || | | ||| || ||| ||||| || ||||| ||
Sbjct 480 AAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACAT 421
Query 19539 AACAAATCTATTTTTATTTT-CTTTAAGAATAGGTTC 19574
|||||||||| ||||| ||| |||| | |||||
Sbjct 420 AACAAATCTACGAGGATTTTCCTTCAAGAGT-GGTTC 385
>seq330
Length=28712
Score = 179 bits (198), Expect = 4e-40
Identities = 535/825 (65%), Gaps = 14/825 (2%)
Strand=Plus/Minus
Query 46977 TCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTC 47036
|| |||||||||| ||||| || || | || ||| || || |||||||| ||||||
Sbjct 6962 TCAACAGTAAACTGAATTGCTTTCGAAGCAGCTTGTGTCCGCAAGTAATACATTCCAGTC 6903
Query 47037 TTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG-TTC 47095
|| || ||| |||| | |||||||| ||| || ||||| ||| | || ||
Sbjct 6902 TTCAATCCTTTCTCCCATGCGTAGAAATGGCAACTTGTCAATTTTCCATACGTTGGATTT 6843
Query 47096 TGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCAT 47155
|| || || |||||| | | ||| ||||||||||||| ||| | ||| ||||||||
Sbjct 6842 TGCAA-ATAAATATTCATACTTTGCAGCTGATCAATAAATTTACCACGATCTGCTGCCAT 6784
Query 47156 ATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTC 47215
|| | ||| || |||| |||||||| || |||||||| | | || | ||| ||
Sbjct 6783 GTCAATAATTACTTTTTGGCTAATCTCCCACACGGTTTTATACAAACGCTTGAGGTCATC 6724
Query 47216 TGGGAGATTA-GTATT--TTGAATAGATCCTCCgttttctataattttgt--tttttaat 47270
|| | | || | ||| ||||||||| || || ||||| ||| | | ||||||||
Sbjct 6723 GGGTATACTAGGGATTCCTTGAATAGA---ACCATTCTCTATTATTATCTTATTTTTAAT 6667
Query 47271 t-catttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329
| || ||| | | | ||| | || ||| | | | ||| |||| |||
Sbjct 6666 TGCAGAATTCCACAATCCTAATTCTATCAAATCTTTGATCAAGTATTTATTTACAACTTG 6607
Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389
|||||||||| || || | || |||| ||||| |||||||| || | ||||
Sbjct 6606 GTATTCTCCAGAAAGCACCCGTCGAGTATAAATATTCGAGGTATATGGCTCGAAGCATTC 6547
Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449
|||| || || || || | ||||| || || ||||| | ||||||||| || |||
Sbjct 6546 ATTAAAACCCAATATCTGCGATGTTGAAGCCGTTGGCATTGGTGCAACTAACAAAGAATT 6487
Query 47450 TCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCA---ATCCCAAAGATCTGA 47506
||| | |||| | |||| || | | ||| ||| | | || ||
Sbjct 6486 TCTCAATCCAAACCTTTGAATATTCTTTTTCAAAGAGTCCCAATCATCGTACAAGTCAGA 6427
Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566
||| | |||||| |||||||| || | |||||| || || || | | |
Sbjct 6426 TGGCTTATGATTCCATAAATCATACTGCAAGATTCCTGCGGAGGCAGGTGACCCTTCAAA 6367
Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626
| | |||||||||| | || | ||| | ||| | ||||||||||| | |||
Sbjct 6366 CGATGTATAAGGACCCTCTATTATAGACAACTCAACAGAAGCTTCCAATGCTGCGTGATA 6307
Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNN 47686
||| ||||||||||||| || || | | || | ||||| ||| |||||||| |
Sbjct 6306 TATGGTTTCAAATATTTGGATATTCAAAGTCTTAGCTTCATGTGAATCAAAAGGTAATCT 6247
Query 47687 NNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTT 47746
|| ||||||||| || |||||||| | ||||||||||||| | ||
Sbjct 6246 AAGTTCAAGGAACAAATCTGCCAAACCCTGAACACCCAATGCAATTGGTCTATGTTTCTT 6187
Query 47747 ATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTAT 47791
|| || || || | || |||||||||| | ||||||
Sbjct 6186 GTTGGATGTTTCTGCGGTTTCTATTGGATATTTGCCAACATCTAT 6142
Score = 138 bits (152), Expect = 1e-27
Identities = 405/619 (65%), Gaps = 4/619 (1%)
Strand=Plus/Minus
Query 48180 AATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCT 48239
|| ||||| ||| | || | ||| |||| ||||||||| ||| || | ||| | | |
Sbjct 5729 AACGACCAGTCCGCGTCTTCTTTGACTCGCCTCATAAATAAATCAGGAACCCATA-ATCC 5671
Query 48240 ATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAA 48298
||| ||||||||||| ||||| | |||||||||||| ||| || | | || | ||
Sbjct 5670 ATAGAATAAATCCCTGGTTCTGTGCTCTTCATTGCCATGATTTTTTCTCATATCTAAAAT 5611
Query 48299 GTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATT 48358
|| | |||||| ||||||| || |||| |||||| || | | | || || ||||||
Sbjct 5610 ATCAAAGATATCACCATGCCAAGGCTCTATATATATAGCGAATGCCCCCGGGCGTTTACC 5551
Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418
||| |||||||||| |||||| || || || ||| | || | | |||||| || | ||
Sbjct 5550 ACCACCTTGATCTACATATCTTGCCGTGTTATTAAACACGCGGAGCATTGGAACCAATCC 5491
Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478
|| | || || || | | || | |||||| || | || | | ||
Sbjct 5490 GCCAGACTTTCCGTTTGTGCTTGCGATGAATGATCCACTGGCACGAATGTCATGAACATG 5431
Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538
|| ||| |||||||| | ||| || || | || | | ||| || | |||||
Sbjct 5430 AACACCAATACCACCGGAGGCTTTGGAAATCAATGCTGTCTCATGAAGCGTTTTGTAAAT 5371
Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACA 48598
|| || || || || ||||| | || |||||| ||| | | | |
Sbjct 5370 CCCATCAATTGAGTCTTCCTTCATAGCAAGTAAGAAACAAGAAGATAAGTAATTAAAATT 5311
Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658
| |||||| ||| |||| ||||| || ||||||| || |||||| || | | |
Sbjct 5310 ACTTCCTGCATTGTATAAAGTTGGTGAAGCATGAACGAAATATTTCTGGGACATGAGCTC 5251
Query 48659 ATATGTTTCAATAACAGAATCTATA-TCCCATTGATGTATACCTATAGATACACGCATTA 48717
||||||||||| || | || | | | || | || || || || || || | | |
Sbjct 5250 GTATGTTTCAATTACTGCTTCAAGATTGTCAAAG-TGAATTCCGATTGACACCCTTAGGA 5192
Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777
|||| || |||||| | || ||| | || || ||||| | | ||| || || ||||
Sbjct 5191 ACATGTACTGAGGTATCTCGCAAATCTCGTCGTTCATTTTAAGCAAATAAGAATTCTCCA 5132
Query 48778 ATGTTTTAAAACCAAAATA 48796
|||| || | |||||||||
Sbjct 5131 ATGTCTTGATACCAAAATA 5113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562091023309200
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