Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq918 598 5e-166 seq2332 443 2e-119 seq330 179 4e-40 >seq918 Length=18345 Score = 598 bits (662), Expect = 5e-166 Identities = 1512/2285 (66%), Gaps = 81/2285 (4%) Strand=Plus/Plus Query 46971 TCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATA 47030 ||||| || | |||||| | ||| | | | || | || |||| |||||| ||||| Sbjct 8838 TCTTTATCAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATC 8897 Query 47031 CCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTA 47090 || ||||| || || |||| || |||||||||||||| || |||||| | Sbjct 8898 CCGGTCTTCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTT 8957 Query 47091 GGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCT 47150 || ||| |||||| ||||| | ||||||| |||||||||||||| ||||||||||| Sbjct 8958 GGATCTTTAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCT 9017 Query 47151 GCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATG 47210 |||||||| | ||| |||| | || ||||||||||| ||||| | |||||| Sbjct 9018 GCCATATCAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATC 9077 Query 47211 TCTTCTGGGAGATTAG-TATT--TTGAATAGATCCTCCgttttctataattttgtttttt 47267 || |||||| |||| || ||||||||| || ||| ||||| | |||| Sbjct 9078 TCAGCTGGGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTA 9137 Query 47268 aat---tcatttga-----ccaaagttttcgttcagttaatgtttttaaAAGATGAGGAT 47319 | | ||||| | ||||| || || ||| | || | |||| |||| Sbjct 9138 ACTGCTTCATTCCAAATACCCAAA----TCAACCA---AATCTCTTAATAAGAAT-GGAT 9189 Query 47320 TAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTT 47379 |||||||||| ||||| |||| || ||||| | ||| || || |||||||||| Sbjct 9190 TAACAATTTGGAATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTT 9249 Query 47380 CTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTA 47439 | | | |||||||||| || || ||||| | ||||| || || ||||| | ||||||| Sbjct 9250 CGAAACATTCATTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTA 9309 Query 47440 ATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAA 47499 | | |||||||| ||||| |||| || | | ||||||||| | Sbjct 9310 AAAGAGAATTTCTTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATCCCAATCCCATA 9369 Query 47500 GATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAAC 47559 || | ||| |||||| ||||||||||| | | || | | | || |||| Sbjct 9370 ATTCAGTTGGTTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAAC 9429 Query 47560 CATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCAC 47619 | ||| | || ||||||||| | | || || | |||| | | ||||| ||| Sbjct 9430 CTGGATAAGATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAG 9489 Query 47620 TATAATATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCTTCTGATGATTCAAAA 47678 || ||| || |||||||| |||| || |||| |||| || |||||| || ||||| Sbjct 9490 CATGATAAATAGTTTCAAAGATTTGAATATTTA-ATTCTCTGGCTTCTTGAGAATCAAAT 9548 Query 47679 GGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTA 47738 || | |||| ||| ||||| ||||| || || | ||||||||||| Sbjct 9549 GGTAATCTTAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTA 9608 Query 47739 TGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTA 47798 | | | || ||| | |||||||| | |||||| | ||| ||| |||| |||| Sbjct 9609 TTTTTCATGTTGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTA 9668 Query 47799 TTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACT----- 47853 |||| | |||||| |||||||| ||||| | || Sbjct 9669 TTTAAATTACGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAA 9728 Query 47854 ------TGTTATTTAT-AACAAACC-TATTAAGTGCTATAGATGCTAGATTACATACAGC 47905 | | ||| | |||||| | |||| || || || |||| ||||| ||||| Sbjct 9729 TGATCATCATCTTTTTCAACAAATGATGGTAAG-GCAATTGAAGCTAAGTTACAAACAGC 9787 Query 47906 TACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGT 47965 || || | || | ||||| | |||||| ||||| ||| |||| ||| | Sbjct 9788 AACTTCTTCAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAAT 9847 Query 47966 ACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGT 48025 ||| ||||| | ||||| | | |||||| || || || || | |||||| || || Sbjct 9848 ACCTAAATTCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGT 9907 Query 48026 TCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGC 48085 |||||||| | || | ||| | ||| || | ||| | | ||||| || Sbjct 9908 ACCAGTTTCAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAATGGTTTG 9967 Query 48086 TCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACAC 48145 |||| | | ||| |||| ||||| |||||| | ||||||||||| ||||| || Sbjct 9968 TCTACCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAAC 10027 Query 48146 ATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTAC 48205 || | |||||||||| ||||||||| | | |||| |||||| ||| | || || Sbjct 10028 ATCAGGTAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCAC 10087 Query 48206 TCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTC 48265 ||| ||||||||| ||| || ||||| | ||| |||||||| || | ||| | ||| Sbjct 10088 TCTCTTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTC 10147 Query 48266 TTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTC 48325 ||| || || ||| || ||| |||| ||| || | ||||| | |||||||||||| Sbjct 10148 TTCTTTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTC 10207 Query 48326 TAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGT 48385 |||||| | || | | | ||||||| |||||||| |||||||| | ||| | ||| || Sbjct 10208 TAAATAAAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGT 10267 Query 48386 ATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAAT 48445 || || |||| | || ||| |||| |||||| || || |||| ||||| || | ||| Sbjct 10268 GTTATTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAAT 10327 Query 48446 ATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAG 48504 ||| ||| ||| | |||||| ||| || || ||| |||||||| || | || | Sbjct 10328 ATATGCCCCAGTAGAACGAATATTATGAATATGTAA-ACCAATACCACCAGCACTCTTTG 10386 Query 48505 ATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATAT 48564 | || | |||||| ||| | |||||||| || || || || ||||||| ||||| Sbjct 10387 AAATCAAAGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAG 10446 Query 48565 TTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAG 48624 | || ||||| ||||||||| ||| ||| || | ||||||||| ||||| | Sbjct 10447 CAACTAAGAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTG 10506 Query 48625 ATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATAT 48684 | ||||| | || | || | ||| | || ||||| | ||||||||| | |||| Sbjct 10507 AACCATGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAGGGATAT 10566 Query 48685 CCCATT--GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAAT 48742 |||| ||| ||||| || | || | ||| | | || ||| ||||||||| ||| Sbjct 10567 --CATTACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAAC 10624 Query 48743 TTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||| ||| | | | || | ||| ||| ||||||| || || || || ||||| || || Sbjct 10625 TTTACCATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATA 10684 Query 48803 --TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACT 48860 ||||| || ||||| || ||||| |||||||| | || ||||| | | | Sbjct 10685 GTTGAAA--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATA 10742 Query 48861 ACATCCATTACATTTTTTG---AT-ATA----ATTGATT-----CCTT---GTAAAGATC 48904 | || ||| | | ||| || ||| | || || ||| || || || Sbjct 10743 ATAT-CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATA 10801 Query 48905 TTC-TACAA--CATCACTA-------AATAtttttt--ttGTTTCTTTATGAAGATTAGA 48952 || || || | | |||| |||||| ||| | |||| |||||| | ||| || Sbjct 10802 ATCATATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGA 10861 Query 48953 TATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA-CTAG 49011 || | |||||||||||||| || ||||||||||||||||| || || |||||| || Sbjct 10862 TACGGCAATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAG 10920 Query 49012 ATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAA 49071 |||| || ||||| |||||||||| || || ||||| ||| | |||| || Sbjct 10921 CAGTTTCAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCTGAAA 10980 Query 49072 T--AACTTTCATTGCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAA 49129 | |||| | || || || | ||| | ||||| | ||| | ||| |||||||| Sbjct 10981 TGGTTCTTTGAGTG--ATGGCGACGGCATCAACATGATTCGGATCTAATCCGTAACATAA 11038 Query 49130 tttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTT 49189 | ||| | ||||| || |||||||| || | || || ||||| || || | ||| Sbjct 11039 TCTTTGAACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTC-TTT 11097 Query 49190 TATAA 49194 ||||| Sbjct 11098 TATAA 11102 >seq2332 Length=8947 Score = 443 bits (490), Expect = 2e-119 Identities = 665/937 (71%), Gaps = 37/937 (4%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 |||||||| || | |||||| |||||||| || |||||||| || ||||||| ||| | Sbjct 1316 TTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTT 1257 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||||||||||||||||| |||||||| | ||| || || ||| | | || | Sbjct 1256 TCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACCAAATGCAACTAAT 1197 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | |||||| || ||||||| || |||| ||||| | || ||||| |||| ||| Sbjct 1196 AATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAATAAA 1137 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 |||| |||| |||||| || | | |||| | ||| |||| ||||| || ||||| Sbjct 1136 CTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATAATC 1077 Query 18910 GATACAACTCTATCTTCATTAGGAGGGT-ATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | | || | ||| || || | || || ||| ||| | ||||| ||||| Sbjct 1076 TTTTCGACAATTTCTGGATCTGGTCTATTATTTAA-ATGAGCAAATAATAAACAAGCAAA 1018 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 |||| ||||| || || ||||||| || |||||||| ||||| |||||||| ||||| Sbjct 1017 ATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACCTGGCAT 958 Query 19029 ------------------------CAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 || |||||||| ||||||||||| ||||| ||||| Sbjct 957 NNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGATGCAAA 898 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 ||||||| |||||| |||||||| || || ||||| ||||||| |||||| |||| Sbjct 897 TGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGCATATAA 838 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCAT 19184 | ||| ||| | ||||||| | | |||||||||||| || || | | |||||| || Sbjct 837 GACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATACATGGAAT 778 Query 19185 -TGTCTCTATAGAATTAAATAGATACATACGCT-CATCTGTATCTTTAACATATGCATCT 19242 ||| || |||| |||||||| || || ||| | | || ||| |||| ||| | ||| Sbjct 777 ATGT-TCAATAGCATTAAATAAGTA-ATCAGCTTCCTTTGGATCCTTAATATAAGTATCA 720 Query 19243 ATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAA 19302 || || | || ||||||||||||||||||| || || || || || ||||| Sbjct 719 ATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCATAAAAT 660 Query 19303 CATCTTGCTTCTGTTATCTGTACTTCA-CTACAAAATCTTTCGACCAAATTTTCATTAAC 19361 || | ||||| | || || ||||| || ||||| |||| | |||||||||||||| Sbjct 659 GATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAAT-TTTCAATTAAATTTTCATTAAC 601 Query 19362 TATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGA 19421 || |||||| || ||||| ||||||||||| | ||| || | | ||||||| Sbjct 600 AATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCATCATC 541 Query 19422 GGTTAATGTAT---TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCA 19478 ||||| ||| ||||||||| | ||||||| |||||| | ||||||| | ||||| Sbjct 540 ATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAGTCCA 481 Query 19479 AAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538 ||| || || |||||||| || || | | ||| || ||| ||||| || ||||| || Sbjct 480 AAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACAT 421 Query 19539 AACAAATCTATTTTTATTTT-CTTTAAGAATAGGTTC 19574 |||||||||| ||||| ||| |||| | ||||| Sbjct 420 AACAAATCTACGAGGATTTTCCTTCAAGAGT-GGTTC 385 >seq330 Length=28712 Score = 179 bits (198), Expect = 4e-40 Identities = 535/825 (65%), Gaps = 14/825 (2%) Strand=Plus/Minus Query 46977 TCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTC 47036 || |||||||||| ||||| || || | || ||| || || |||||||| |||||| Sbjct 6962 TCAACAGTAAACTGAATTGCTTTCGAAGCAGCTTGTGTCCGCAAGTAATACATTCCAGTC 6903 Query 47037 TTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG-TTC 47095 || || ||| |||| | |||||||| ||| || ||||| ||| | || || Sbjct 6902 TTCAATCCTTTCTCCCATGCGTAGAAATGGCAACTTGTCAATTTTCCATACGTTGGATTT 6843 Query 47096 TGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCAT 47155 || || || |||||| | | ||| ||||||||||||| ||| | ||| |||||||| Sbjct 6842 TGCAA-ATAAATATTCATACTTTGCAGCTGATCAATAAATTTACCACGATCTGCTGCCAT 6784 Query 47156 ATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTC 47215 || | ||| || |||| |||||||| || |||||||| | | || | ||| || Sbjct 6783 GTCAATAATTACTTTTTGGCTAATCTCCCACACGGTTTTATACAAACGCTTGAGGTCATC 6724 Query 47216 TGGGAGATTA-GTATT--TTGAATAGATCCTCCgttttctataattttgt--tttttaat 47270 || | | || | ||| ||||||||| || || ||||| ||| | | |||||||| Sbjct 6723 GGGTATACTAGGGATTCCTTGAATAGA---ACCATTCTCTATTATTATCTTATTTTTAAT 6667 Query 47271 t-catttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329 | || ||| | | | ||| | || ||| | | | ||| |||| ||| Sbjct 6666 TGCAGAATTCCACAATCCTAATTCTATCAAATCTTTGATCAAGTATTTATTTACAACTTG 6607 Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389 |||||||||| || || | || |||| ||||| |||||||| || | |||| Sbjct 6606 GTATTCTCCAGAAAGCACCCGTCGAGTATAAATATTCGAGGTATATGGCTCGAAGCATTC 6547 Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449 |||| || || || || | ||||| || || ||||| | ||||||||| || ||| Sbjct 6546 ATTAAAACCCAATATCTGCGATGTTGAAGCCGTTGGCATTGGTGCAACTAACAAAGAATT 6487 Query 47450 TCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCA---ATCCCAAAGATCTGA 47506 ||| | |||| | |||| || | | ||| ||| | | || || Sbjct 6486 TCTCAATCCAAACCTTTGAATATTCTTTTTCAAAGAGTCCCAATCATCGTACAAGTCAGA 6427 Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566 ||| | |||||| |||||||| || | |||||| || || || | | | Sbjct 6426 TGGCTTATGATTCCATAAATCATACTGCAAGATTCCTGCGGAGGCAGGTGACCCTTCAAA 6367 Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626 | | |||||||||| | || | ||| | ||| | ||||||||||| | ||| Sbjct 6366 CGATGTATAAGGACCCTCTATTATAGACAACTCAACAGAAGCTTCCAATGCTGCGTGATA 6307 Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNN 47686 ||| ||||||||||||| || || | | || | ||||| ||| |||||||| | Sbjct 6306 TATGGTTTCAAATATTTGGATATTCAAAGTCTTAGCTTCATGTGAATCAAAAGGTAATCT 6247 Query 47687 NNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTT 47746 || ||||||||| || |||||||| | ||||||||||||| | || Sbjct 6246 AAGTTCAAGGAACAAATCTGCCAAACCCTGAACACCCAATGCAATTGGTCTATGTTTCTT 6187 Query 47747 ATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTAT 47791 || || || || | || |||||||||| | |||||| Sbjct 6186 GTTGGATGTTTCTGCGGTTTCTATTGGATATTTGCCAACATCTAT 6142 Score = 138 bits (152), Expect = 1e-27 Identities = 405/619 (65%), Gaps = 4/619 (1%) Strand=Plus/Minus Query 48180 AATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCT 48239 || ||||| ||| | || | ||| |||| ||||||||| ||| || | ||| | | | Sbjct 5729 AACGACCAGTCCGCGTCTTCTTTGACTCGCCTCATAAATAAATCAGGAACCCATA-ATCC 5671 Query 48240 ATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAA 48298 ||| ||||||||||| ||||| | |||||||||||| ||| || | | || | || Sbjct 5670 ATAGAATAAATCCCTGGTTCTGTGCTCTTCATTGCCATGATTTTTTCTCATATCTAAAAT 5611 Query 48299 GTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATT 48358 || | |||||| ||||||| || |||| |||||| || | | | || || |||||| Sbjct 5610 ATCAAAGATATCACCATGCCAAGGCTCTATATATATAGCGAATGCCCCCGGGCGTTTACC 5551 Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 ||| |||||||||| |||||| || || || ||| | || | | |||||| || | || Sbjct 5550 ACCACCTTGATCTACATATCTTGCCGTGTTATTAAACACGCGGAGCATTGGAACCAATCC 5491 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 || | || || || | | || | |||||| || | || | | || Sbjct 5490 GCCAGACTTTCCGTTTGTGCTTGCGATGAATGATCCACTGGCACGAATGTCATGAACATG 5431 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 || ||| |||||||| | ||| || || | || | | ||| || | ||||| Sbjct 5430 AACACCAATACCACCGGAGGCTTTGGAAATCAATGCTGTCTCATGAAGCGTTTTGTAAAT 5371 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACA 48598 || || || || || ||||| | || |||||| ||| | | | | Sbjct 5370 CCCATCAATTGAGTCTTCCTTCATAGCAAGTAAGAAACAAGAAGATAAGTAATTAAAATT 5311 Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 | |||||| ||| |||| ||||| || ||||||| || |||||| || | | | Sbjct 5310 ACTTCCTGCATTGTATAAAGTTGGTGAAGCATGAACGAAATATTTCTGGGACATGAGCTC 5251 Query 48659 ATATGTTTCAATAACAGAATCTATA-TCCCATTGATGTATACCTATAGATACACGCATTA 48717 ||||||||||| || | || | | | || | || || || || || || | | | Sbjct 5250 GTATGTTTCAATTACTGCTTCAAGATTGTCAAAG-TGAATTCCGATTGACACCCTTAGGA 5192 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||| || |||||| | || ||| | || || ||||| | | ||| || || |||| Sbjct 5191 ACATGTACTGAGGTATCTCGCAAATCTCGTCGTTCATTTTAAGCAAATAAGAATTCTCCA 5132 Query 48778 ATGTTTTAAAACCAAAATA 48796 |||| || | ||||||||| Sbjct 5131 ATGTCTTGATACCAAAATA 5113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562091023309200