Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2332 304 2e-77 >seq2332 Length=8947 Score = 304 bits (336), Expect = 2e-77 Identities = 632/934 (68%), Gaps = 57/934 (6%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||||| || ||||| |||| ||||| || || || || | Sbjct 1329 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 1270 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA------TAGTACT 36985 || ||| |||||||||||||||||||||||||| |||||| | || ||| Sbjct 1269 TAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACC 1210 Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045 | ||| | | | || | |||| ||||||||||| | |||| |||||| | || Sbjct 1209 AAATGCAACTA-----ATAATC-TATCGGCAACAAATTCAACATATTGACACATCAATTT 1156 Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTA 37104 | ||| ||||| | || | ||||| | |||||| |||| | || ||||| || | Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAA-ATATTCCTTTTCAAT-A 1098 Query 37105 TTACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAAT 37161 | || | ||| ||| ||| || | | || |||| | ||| || ||||||| Sbjct 1097 T--CAACTGCTTCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAAT 1040 Query 37162 ATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCAT 37221 ||| |||||||| ||||||||| |||||||||||||||||||| || ||||||| Sbjct 1039 GAGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCAT 980 Query 37222 TAGAAAAGGTTAATCCTGGCATT------------------------AAACCTCtttttt 37257 | ||||| ||||| |||||||| ||||||||||| | Sbjct 979 TTGAAAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCT 920 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| || || | |||||| |||||| |||||||||||||||||| || ||||| | Sbjct 919 TTAACCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGG 860 Query 37318 CTACAAGACGTGTACCGAAAGTTGAACT-ATAATCAGAAATCCAtttttttGTCCAATCT 37376 | || | | | | | | | || || | ||||| ||||||| || || |||||| Sbjct 859 CAACTAATCTTTCAGC-ATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCA 801 Query 37377 GCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCA 37436 || ||| | ||| |||| ||| |||||| || || || | ||| | |||| Sbjct 800 GCTTTTCTTCTAATACATGGAATATGTTCAATAGCATTAAATA---AGTAATCAGCTTCC 744 Query 37437 CT---ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493 | ||| | |||||||||||||||| | ||| |||| || |||||||||||| Sbjct 743 TTTGGATCCTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCA 684 Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC-GTTAAAAAA 37552 || || || ||||||||||| | ||||||||| | |||||| || | | ||||| Sbjct 683 ATCATAATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAA 624 Query 37553 CCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATA 37612 | | | ||| ||||||||||| || |||||| || |||||||| || | || Sbjct 623 TTT-TCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCG 565 Query 37613 TTTTATAAAATGTCTTTCATCATTTGATAATTT---TTTCCAATCATTAATATCTTTTGA 37669 || || | ||||||||||| |||||| | ||||||||| | |||||| Sbjct 564 AGAAATGAAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACT 505 Query 37670 TAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAAT 37729 |||||||| ||| ||| | |||||||| ||| ||| || || | |||||| Sbjct 504 TAAATCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAAT 445 Query 37730 ATCATTATGTTGTATTGGAAATATTACAAATCTA 37763 |||| || | |||||||| || ||||||||| Sbjct 444 TTCATGATATCTAATTGGAAACATAACAAATCTA 411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592298067981200