Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 304 2e-77
>seq2332
Length=8947
Score = 304 bits (336), Expect = 2e-77
Identities = 632/934 (68%), Gaps = 57/934 (6%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || |||||||| || ||||| |||| ||||| || || || || |
Sbjct 1329 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 1270
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA------TAGTACT 36985
|| ||| |||||||||||||||||||||||||| |||||| | || |||
Sbjct 1269 TAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACC 1210
Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045
| ||| | | | || | |||| ||||||||||| | |||| |||||| | ||
Sbjct 1209 AAATGCAACTA-----ATAATC-TATCGGCAACAAATTCAACATATTGACACATCAATTT 1156
Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTA 37104
| ||| ||||| | || | ||||| | |||||| |||| | || ||||| || |
Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAA-ATATTCCTTTTCAAT-A 1098
Query 37105 TTACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAAT 37161
| || | ||| ||| ||| || | | || |||| | ||| || |||||||
Sbjct 1097 T--CAACTGCTTCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAAT 1040
Query 37162 ATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCAT 37221
||| |||||||| ||||||||| |||||||||||||||||||| || |||||||
Sbjct 1039 GAGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCAT 980
Query 37222 TAGAAAAGGTTAATCCTGGCATT------------------------AAACCTCtttttt 37257
| ||||| ||||| |||||||| ||||||||||| |
Sbjct 979 TTGAAAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCT 920
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
| | ||| || || | |||||| |||||| |||||||||||||||||| || ||||| |
Sbjct 919 TTAACCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGG 860
Query 37318 CTACAAGACGTGTACCGAAAGTTGAACT-ATAATCAGAAATCCAtttttttGTCCAATCT 37376
| || | | | | | | | || || | ||||| ||||||| || || ||||||
Sbjct 859 CAACTAATCTTTCAGC-ATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCA 801
Query 37377 GCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCA 37436
|| ||| | ||| |||| ||| |||||| || || || | ||| | ||||
Sbjct 800 GCTTTTCTTCTAATACATGGAATATGTTCAATAGCATTAAATA---AGTAATCAGCTTCC 744
Query 37437 CT---ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493
| ||| | |||||||||||||||| | ||| |||| || ||||||||||||
Sbjct 743 TTTGGATCCTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCA 684
Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC-GTTAAAAAA 37552
|| || || ||||||||||| | ||||||||| | |||||| || | | |||||
Sbjct 683 ATCATAATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAA 624
Query 37553 CCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATA 37612
| | | ||| ||||||||||| || |||||| || |||||||| || | ||
Sbjct 623 TTT-TCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCG 565
Query 37613 TTTTATAAAATGTCTTTCATCATTTGATAATTT---TTTCCAATCATTAATATCTTTTGA 37669
|| || | ||||||||||| |||||| | ||||||||| | ||||||
Sbjct 564 AGAAATGAAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACT 505
Query 37670 TAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAAT 37729
|||||||| ||| ||| | |||||||| ||| ||| || || | ||||||
Sbjct 504 TAAATCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAAT 445
Query 37730 ATCATTATGTTGTATTGGAAATATTACAAATCTA 37763
|||| || | |||||||| || |||||||||
Sbjct 444 TTCATGATATCTAATTGGAAACATAACAAATCTA 411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592298067981200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |