Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 176 4e-39
seq2023 143 2e-29
>seq2193
Length=52601
Score = 176 bits (194), Expect = 4e-39
Identities = 178/232 (77%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | |||||||||||| | || ||||| ||||| || ||||| ||||
Sbjct 24824 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 24765
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || |||||||||||||| ||||| |||||||| |||||||| || |||
Sbjct 24764 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 24705
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| |||||||| ||||| || ||| | || | ||||||||| | ||| |||
Sbjct 24704 ATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 24645
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTA 101474
|| | || | || || || |||||||| || || || || ||||| ||||
Sbjct 24644 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATTGTTA 24593
Score = 161 bits (178), Expect = 8e-35
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||||||| | || |||||||| | |||||||| ||||| || ||||||||||
Sbjct 25280 CCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAT 25221
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || |||||||||||||| || || |||||||| |||||||| || |||
Sbjct 25220 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 25161
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||| ||||| || ||| | || | ||||||||| | ||| |||
Sbjct 25160 ATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 25101
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | || || || ||||| || || || || || |||||
Sbjct 25100 TCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | |||||||||||| | || ||||| ||||| || ||||| || |
Sbjct 25052 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 24993
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || || ||||||||||| || || |||||||| |||||||| || |||
Sbjct 24992 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 24933
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||||||||| ||| || | || | |||||||| | ||| |||
Sbjct 24932 ATACCTTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACT 24873
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| || || || ||||| || || || || || |||||
Sbjct 24872 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
>seq2023
Length=11923
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||||||| | ||| ||||| || | ||||||||| ||||| || ||||| || |
Sbjct 4140 CCACCTCTTAATCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAT 4081
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| |||| || ||||||||||| ||||| || || | ||||| || || |||
Sbjct 4080 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGA 4021
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||| || || ||| ||| | || | ||||||||| | ||| |||
Sbjct 4020 ATACCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAACT 3961
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | || || || ||||| || || || || || |||||
Sbjct 3960 TCTAAGGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 3914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396266181003210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |