Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq918 282 2e-71
seq330 159 2e-34
>seq918
Length=18345
Score = 282 bits (312), Expect = 2e-71
Identities = 1002/1539 (65%), Gaps = 65/1539 (4%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
||||| |||| | |||||||||| | | ||||||||| ||||||| |||||||||
Sbjct 9201 AATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCA 9260
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
||||| ||||||||||| || || || || |||||||| || | ||| || ||||||
Sbjct 9261 TTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTT 9320
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195
|| || |||| ||| | || | ||| ||||| |||||||||| | | || |
Sbjct 9321 CTTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATCCCAATCCCA----TAATTCAGT 9376
Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGA---TTGA 25252
| | | || ||| |||||||| ||||||| || || | |||||| || | ||
Sbjct 9377 TGGTTTTC--TATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGA 9434
Query 25253 TCAAAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAACGCAGCA 25312
| ||| | ||| ||||| | | || | || | || || | ||||||
Sbjct 9435 T---AAGATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCA 9491
Query 25313 TAATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCA 25372
| ||| ||| ||||||| || | ||||| | |||| || ||| || |
Sbjct 9492 TGATAAATAGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGGT 9551
Query 25373 ATTTCCATTAAGGC---GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGA 25429
| | |||| || ||| | ||| || || || || || || || ||| ||| | |
Sbjct 9552 AATC---TTAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTA 9608
Query 25430 TGTTTATTATTACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTA 25489
| ||| | || | | | ||||| |||||| | || ||| || || |||
Sbjct 9609 TTTTTCATGTTGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTA 9668
Query 25490 TCTAGATTCTTTATGGCAAGCTTTGTGTATTTTCTCAACTCAATAAAGTCAAAATAAGGC 25549
| || ||| | ||| ||| || |||| || | | | | ||||||| | |
Sbjct 9669 TTTAAATTACGAGTAACAATCTTGGTA-ATTT---CATGTAATTTA--TCAAAATTATAC 9722
Query 25550 --TTATCGTTTAT-ATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAA 25606
| | | | || |||| ||| |||||| | ||| || ||||| ||||| ||||||
Sbjct 9723 CATGAATGATCATCATCTTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAA 9782
Query 25607 ACAGCTTGTTCTTTCCCGTCA-GAATATTCATTGATCTCGATACATAAGTTGCTAGATTT 25665
||||| ||||| | || | ||||||||| || || |||||| ||| |||||
Sbjct 9783 ACAGCAACTTCTT-CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTT 9841
Query 25666 GATTACTCCATAATTCTTTTGATTATTGCATGTATTGACAAT-ATCTTTATATCCTAAAT 25724
|| | || ||||||||||||| | | | | | |||| |||||||||| | |
Sbjct 9842 AATAATACCTAAATTCTTTTGATTGGT-CTTTTGGTTACAAGCATCTTTATATAACATAA 9900
Query 25725 ATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTTA 25784
|||| || || |||||| |||| | | | || || | ||| | || | || || |
Sbjct 9901 ATGGAGTACCAGTTTCAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAA 9960
Query 25785 C--TTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTTG 25842
||| | ||| | | ||| ||| || | |||| || | || ||||||| |
Sbjct 9961 TGGTTTGTCTACCACG--ACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATC 10018
Query 25843 ATTTATTTTC-TCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATA 25901
| || | |||| || ||| ||| | || | || | ||||
Sbjct 10019 ACC-ATAAACATCAGGTAAC------CCAG-------GAGCTTCAT--TAGGGGAAAATA 10062
Query 25902 AATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCAT 25961
| ||||||| ||||||| || ||| ||| |||||||||||| |||||||| | |||
Sbjct 10063 ATGTCCAATCACCATTTTGTTCCACTCTCTTCATAAATAAATCAGGAATCCATAATGCTG 10122
Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021
||||||||||| ||||| ||||||||||| || ||||| ||| | | ||| | ||||
Sbjct 10123 GGAATAAATCTCTGGCTCTAATTTCTTCTTTACCTTGATTTTTTCTAATATCAATAAAAT 10182
Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081
||||||||||||| ||||||||||||||||| | ||||| ||| ||| || |
Sbjct 10183 CAAAAATATCTGAATGCCATGGTTCTAAATAAAGGGCAAATGCTCCTGGTCTCTTATTAC 10242
Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAG 26141
|||||||||| || || | || || | ||||||||| | ||| || | |||| | |
Sbjct 10243 CACCTTGATCAACATAACGGGCGGTGTTATTGAAAACACGTACCATGGGGA-TAATACCG 10301
Query 26142 TTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200
||| || | ||||| || | ||| | | || || || | ||||| ||| |||
Sbjct 10302 TTGGAAGTACCGTTGGTACCGGCAATATATGCCCCAGTAGAACGAATATTATGAATATGT 10361
Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA--TCTGAAACTGTATCGAAAA 26258
| ||| || |||||||| | |||||||| |||||| | | ||| ||||| | |
Sbjct 10362 AAACCAATACCACCAGCACTCTTTGAAATCAAAGCACAAGTTTTCAAA--GTATCATAGA 10419
Query 26259 TTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAG 26318
| || | || |||| ||||||| | | ||| ||||| ||||| | ||| | | |
Sbjct 10420 TCCCATCAATTGAATCATCTTTCATAGCAACTAAGAAACATGAAGACATTTGTGGACTTG 10479
Query 26319 TTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCAAAGC-- 26376
|| || | ||||||||| || |||| | ||||||| || | ||| | | | |
Sbjct 10480 GAGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGAAAAA--CTTTTGTGACATCAT 10537
Query 26377 TGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAA 26436
|||||| ||||| |||| | ||||| | | | || |||| || ||| |
Sbjct 10538 ATTATAAGATTCAATAACTCGAGGGATATCATTACCATGAATACCAATGGCCACTCTCAT 10597
Query 26437 CCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTT 26496
| || ||| |||| |||| || ||| | | |||| | ||||||||| |
Sbjct 10598 GATTAAATGTTGTGGTCTTTCAGCAACTTTA---CCATTAACTCTTAATAAATAAGATCT 10654
Query 26497 TTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATC 26535
||| ||||| || || || ||||||| || ||||||||
Sbjct 10655 TTCCAAAGTCTTGAACCCGAAATAATTATAGTTGAAATC 10693
>seq330
Length=28712
Score = 159 bits (176), Expect = 2e-34
Identities = 293/426 (69%), Gaps = 10/426 (2%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||||||||| |||| ||| | | |||| |||||||| || | ||| ||||| ||
Sbjct 5697 CATAAATAAATCAGGAACCCATAATCCATAGAATAAATCCCTGGTTCTGTGCTCTTCATT 5638
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| ||||| ||| | | |||||| | |||||| ||||| ||||| || |||| |||
Sbjct 5637 GCCATGATTTTTTCTCATATCTAAAATATCAAAGATATCACCATGCCAAGGCTCTATATA 5578
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
||||| || || | ||| || |||||||||||||| |||||||| || | |||
Sbjct 5577 TATAGCGAATGCCCCCGGGCGTTTACCACCACCTTGATCTACATATCTTGCCGTGTTATT 5518
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT----ATGAATCT 26168
|| || | ||||||||| ||||| || |||||||||||| ||||||
Sbjct 5517 AAACACGCGGAGCATTGGAACCAATCCGCCAGACTTTCCGTTTGTGCTTGCGATGAAT-- 5460
Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228
||||| | | | ||| || ||| |||||| ||| || ||||| | ||| ||||
Sbjct 5459 --GATCCACTGGCACGAATGTCATGAACATGAACACCAATACCACCGGAGGCTTTGGAAA 5402
Query 26229 TAGCTGCACAATC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCT 26287
| ||| || |||| | || | | |||| || | || || | ||||| |
Sbjct 5401 TCAATGCTGTCTCATGAAGC-GTTTTGTAAATCCCATCAATTGAGTCTTCCTTCATAGCA 5343
Query 26288 AATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTA 26347
| ||| |||||||||||||| | | | | |||||| ||| |||| || |||| |
Sbjct 5342 AGTAAGAAACAAGAAGATAAGTAATTAAAATTACTTCCTGCATTGTATAAAGTTGGTGAA 5283
Query 26348 GCATGA 26353
||||||
Sbjct 5282 GCATGA 5277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253032197669750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |