Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq918 282 2e-71 seq330 159 2e-34 >seq918 Length=18345 Score = 282 bits (312), Expect = 2e-71 Identities = 1002/1539 (65%), Gaps = 65/1539 (4%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| |||| | |||||||||| | | ||||||||| ||||||| ||||||||| Sbjct 9201 AATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCA 9260 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 ||||| ||||||||||| || || || || |||||||| || | ||| || |||||| Sbjct 9261 TTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTT 9320 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195 || || |||| ||| | || | ||| ||||| |||||||||| | | || | Sbjct 9321 CTTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATCCCAATCCCA----TAATTCAGT 9376 Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGA---TTGA 25252 | | | || ||| |||||||| ||||||| || || | |||||| || | || Sbjct 9377 TGGTTTTC--TATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGA 9434 Query 25253 TCAAAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAACGCAGCA 25312 | ||| | ||| ||||| | | || | || | || || | |||||| Sbjct 9435 T---AAGATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCA 9491 Query 25313 TAATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCA 25372 | ||| ||| ||||||| || | ||||| | |||| || ||| || | Sbjct 9492 TGATAAATAGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGGT 9551 Query 25373 ATTTCCATTAAGGC---GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGA 25429 | | |||| || ||| | ||| || || || || || || || ||| ||| | | Sbjct 9552 AATC---TTAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTA 9608 Query 25430 TGTTTATTATTACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTA 25489 | ||| | || | | | ||||| |||||| | || ||| || || ||| Sbjct 9609 TTTTTCATGTTGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTA 9668 Query 25490 TCTAGATTCTTTATGGCAAGCTTTGTGTATTTTCTCAACTCAATAAAGTCAAAATAAGGC 25549 | || ||| | ||| ||| || |||| || | | | | ||||||| | | Sbjct 9669 TTTAAATTACGAGTAACAATCTTGGTA-ATTT---CATGTAATTTA--TCAAAATTATAC 9722 Query 25550 --TTATCGTTTAT-ATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAA 25606 | | | | || |||| ||| |||||| | ||| || ||||| ||||| |||||| Sbjct 9723 CATGAATGATCATCATCTTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAA 9782 Query 25607 ACAGCTTGTTCTTTCCCGTCA-GAATATTCATTGATCTCGATACATAAGTTGCTAGATTT 25665 ||||| ||||| | || | ||||||||| || || |||||| ||| ||||| Sbjct 9783 ACAGCAACTTCTT-CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTT 9841 Query 25666 GATTACTCCATAATTCTTTTGATTATTGCATGTATTGACAAT-ATCTTTATATCCTAAAT 25724 || | || ||||||||||||| | | | | | |||| |||||||||| | | Sbjct 9842 AATAATACCTAAATTCTTTTGATTGGT-CTTTTGGTTACAAGCATCTTTATATAACATAA 9900 Query 25725 ATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTTA 25784 |||| || || |||||| |||| | | | || || | ||| | || | || || | Sbjct 9901 ATGGAGTACCAGTTTCAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAA 9960 Query 25785 C--TTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTTG 25842 ||| | ||| | | ||| ||| || | |||| || | || ||||||| | Sbjct 9961 TGGTTTGTCTACCACG--ACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATC 10018 Query 25843 ATTTATTTTC-TCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATA 25901 | || | |||| || ||| ||| | || | || | |||| Sbjct 10019 ACC-ATAAACATCAGGTAAC------CCAG-------GAGCTTCAT--TAGGGGAAAATA 10062 Query 25902 AATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCAT 25961 | ||||||| ||||||| || ||| ||| |||||||||||| |||||||| | ||| Sbjct 10063 ATGTCCAATCACCATTTTGTTCCACTCTCTTCATAAATAAATCAGGAATCCATAATGCTG 10122 Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021 ||||||||||| ||||| ||||||||||| || ||||| ||| | | ||| | |||| Sbjct 10123 GGAATAAATCTCTGGCTCTAATTTCTTCTTTACCTTGATTTTTTCTAATATCAATAAAAT 10182 Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081 ||||||||||||| ||||||||||||||||| | ||||| ||| ||| || | Sbjct 10183 CAAAAATATCTGAATGCCATGGTTCTAAATAAAGGGCAAATGCTCCTGGTCTCTTATTAC 10242 Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAG 26141 |||||||||| || || | || || | ||||||||| | ||| || | |||| | | Sbjct 10243 CACCTTGATCAACATAACGGGCGGTGTTATTGAAAACACGTACCATGGGGA-TAATACCG 10301 Query 26142 TTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200 ||| || | ||||| || | ||| | | || || || | ||||| ||| ||| Sbjct 10302 TTGGAAGTACCGTTGGTACCGGCAATATATGCCCCAGTAGAACGAATATTATGAATATGT 10361 Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA--TCTGAAACTGTATCGAAAA 26258 | ||| || |||||||| | |||||||| |||||| | | ||| ||||| | | Sbjct 10362 AAACCAATACCACCAGCACTCTTTGAAATCAAAGCACAAGTTTTCAAA--GTATCATAGA 10419 Query 26259 TTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAG 26318 | || | || |||| ||||||| | | ||| ||||| ||||| | ||| | | | Sbjct 10420 TCCCATCAATTGAATCATCTTTCATAGCAACTAAGAAACATGAAGACATTTGTGGACTTG 10479 Query 26319 TTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCAAAGC-- 26376 || || | ||||||||| || |||| | ||||||| || | ||| | | | | Sbjct 10480 GAGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGAAAAA--CTTTTGTGACATCAT 10537 Query 26377 TGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAA 26436 |||||| ||||| |||| | ||||| | | | || |||| || ||| | Sbjct 10538 ATTATAAGATTCAATAACTCGAGGGATATCATTACCATGAATACCAATGGCCACTCTCAT 10597 Query 26437 CCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTT 26496 | || ||| |||| |||| || ||| | | |||| | ||||||||| | Sbjct 10598 GATTAAATGTTGTGGTCTTTCAGCAACTTTA---CCATTAACTCTTAATAAATAAGATCT 10654 Query 26497 TTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATC 26535 ||| ||||| || || || ||||||| || |||||||| Sbjct 10655 TTCCAAAGTCTTGAACCCGAAATAATTATAGTTGAAATC 10693 >seq330 Length=28712 Score = 159 bits (176), Expect = 2e-34 Identities = 293/426 (69%), Gaps = 10/426 (2%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||||||| |||| ||| | | |||| |||||||| || | ||| ||||| || Sbjct 5697 CATAAATAAATCAGGAACCCATAATCCATAGAATAAATCCCTGGTTCTGTGCTCTTCATT 5638 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||||| ||| | | |||||| | |||||| ||||| ||||| || |||| ||| Sbjct 5637 GCCATGATTTTTTCTCATATCTAAAATATCAAAGATATCACCATGCCAAGGCTCTATATA 5578 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 ||||| || || | ||| || |||||||||||||| |||||||| || | ||| Sbjct 5577 TATAGCGAATGCCCCCGGGCGTTTACCACCACCTTGATCTACATATCTTGCCGTGTTATT 5518 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT----ATGAATCT 26168 || || | ||||||||| ||||| || |||||||||||| |||||| Sbjct 5517 AAACACGCGGAGCATTGGAACCAATCCGCCAGACTTTCCGTTTGTGCTTGCGATGAAT-- 5460 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 ||||| | | | ||| || ||| |||||| ||| || ||||| | ||| |||| Sbjct 5459 --GATCCACTGGCACGAATGTCATGAACATGAACACCAATACCACCGGAGGCTTTGGAAA 5402 Query 26229 TAGCTGCACAATC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCT 26287 | ||| || |||| | || | | |||| || | || || | ||||| | Sbjct 5401 TCAATGCTGTCTCATGAAGC-GTTTTGTAAATCCCATCAATTGAGTCTTCCTTCATAGCA 5343 Query 26288 AATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTA 26347 | ||| |||||||||||||| | | | | |||||| ||| |||| || |||| | Sbjct 5342 AGTAAGAAACAAGAAGATAAGTAATTAAAATTACTTCCTGCATTGTATAAAGTTGGTGAA 5283 Query 26348 GCATGA 26353 |||||| Sbjct 5282 GCATGA 5277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253032197669750