Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq918 167 3e-36
seq1950 98.7 1e-15
seq2231 95.1 1e-14
>seq918
Length=18345
Score = 167 bits (184), Expect = 3e-36
Identities = 479/727 (66%), Gaps = 16/727 (2%)
Strand=Plus/Minus
Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958
|| || || ||||| || |||| |||| | || || |||||||||||| | |||| ||
Sbjct 9922 CAAACTGAAACTGGTACTCCATTTATGTTATATAAAGATGCTTGTAACCAAAAGACCAAT 9863
Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018
||||||||||| || | || || || ||| | || |||||| | || || ||
Sbjct 9862 CAAAAGAATTTAGGTATTATTAAATCATCCAATTTATGTTGTGAAATTGTTGAATATTCA 9803
Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT 76078
|| || |||||||| || || || ||||| ||| | ||| | ||| |
Sbjct 9802 TCACCTGAAGAAGTTGCTGTTTGTAACTTAGCTTCAATTGCCTTACCATCATTTGTTGAA 9743
Query 76079 GAAGA-GACTCGCACTTTTG-----ATTATGAAAAACTTCATGAAATCACAAAGATTGTT 76132
|||| || || | || ||| ||| ||| | |||||||| || |||||||||
Sbjct 9742 AAAGATGATGATCATTCATGGTATAATTTTGATAAATTACATGAAATTACCAAGATTGTT 9683
Query 76133 ACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAA 76191
|| ||| |||| ||| ||||| | || | |||||| ||| ||| || ||
Sbjct 9682 ACTCGTAATTTAAATAAAGTTATTGATCGTAACTATTATCCAGTTCCAGA-AGCCAAAAC 9624
Query 76192 GTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT 76251
|| || ||| | | ||||| |||| ||||| || |||||| | || |||| ||| ||
Sbjct 9623 TTCCAACATGAAAAATAGACCAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCATTCAT 9564
Query 76252 TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGA 76311
| | | |||||||||| | ||||||| || | ||| || ||||||||
Sbjct 9563 GGCATTAAGATTACCATTTGATTCTCAAGAAGCCAGAGAATTAAATATTCAAATCTTTGA 9504
Query 76312 AACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTA 76371
||| || ||||| || || |||| | | |||||| || ||| ||||| | ||
Sbjct 9503 AACTATTTATCATGCTGCCGTGGAAACTTCTATTGAATTAGCCCAAGAAGAAGGTCCTTA 9444
Query 76372 TGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGG 76431
||| | | | ||||| || || || || || | | || | |||| | | ||||
Sbjct 9443 TGAATCTTATCCAGGTTCACCTGCATCTCAGGGTTTATTACAATATGATTTAT-GGAATA 9385
Query 76432 TGAAACCAAGCTCAACTA--CGACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGG 76487
||||||| || || || || |||||| | ||| || ||| ||| | | |
Sbjct 9384 GAAAACCAA-CTGAATTATGGGATTGGGATACCTTAAAGCAAAACATGGCAA--AACATG 9328
Query 76488 GTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 76547
| | | || |||||| | || || |||||||| || || || |||||||||| |
Sbjct 9327 GATTAAGAAATTCTCTTTTAGTTGCCCCTATGCCAACTGCTTCAACATCACAAATCTTAG 9268
Query 76548 GTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAG 76607
||||||||||||| || |||||||| || ||||||| || |||||| || || |
Sbjct 9267 GTAATAATGAATGTTTCGAACCATATACTTCAAACATTTATTCAAGAAGAGTTCTTGCTG 9208
Query 76608 GTGAGTT 76614
|||| ||
Sbjct 9207 GTGAATT 9201
>seq1950
Length=3064
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954
|| || ||||| ||||| || | ||||| || | || ||||| ||||||||| ||||
Sbjct 636 TTAACTTCAAAATCTTTATCACTATGATTAAATAATACAACTTTAACTTCACCTCTATAA 577
Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014
|| | ||||||||| || |||||| |||||||||||| ||||| | || || ||
Sbjct 576 TCAGCATCAATAACTCCAGCACCAGTAGAAATACCATGCTTGACAGCTAATCCAGAACGA 517
Query 28015 GGTGCAACACGACCATA 28031
|| |||||||| |||||
Sbjct 516 GGAGCAACACGGCCATA 500
>seq2231
Length=145420
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
||||| || ||||| |||| || |||| ||||| ||||| || || ||||| ||
Sbjct 126212 GGTGCGAAAATCCCTAGAGGGGCAATTCTTTCGGGTCCTCCAGGAACTGGTAAGACTCTT 126271
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394
|| ||| | |||| || |||||| || || || ||| | | || |||| | |
Sbjct 126272 CTTGCCAGGGCCACTGCTGGTGAAGCAGGGGTACCTTTCTTTTCTGTT-TCTGGTTCTGA 126330
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
||||| || |||||||| ||||||||||| | || || || | || ||| ||
Sbjct 126331 ATTTGTAGAAATGTTTGTGGGTGTGGGTGCATCTCGTGTACGTGACTTATTCAAAACTGC 126390
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGC 175510
|| |||||| || | |||||||| ||||||||||||||||| | || ||||
Sbjct 126391 TCGTGAAAATGCTCCTTCAATTGTCTTTGTTGATGAGATTGATGCGATTGGGAAGC 126446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596550733486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |