Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq918 167 3e-36 seq1950 98.7 1e-15 seq2231 95.1 1e-14 >seq918 Length=18345 Score = 167 bits (184), Expect = 3e-36 Identities = 479/727 (66%), Gaps = 16/727 (2%) Strand=Plus/Minus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 || || || ||||| || |||| |||| | || || |||||||||||| | |||| || Sbjct 9922 CAAACTGAAACTGGTACTCCATTTATGTTATATAAAGATGCTTGTAACCAAAAGACCAAT 9863 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 ||||||||||| || | || || || ||| | || |||||| | || || || Sbjct 9862 CAAAAGAATTTAGGTATTATTAAATCATCCAATTTATGTTGTGAAATTGTTGAATATTCA 9803 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT 76078 || || |||||||| || || || ||||| ||| | ||| | ||| | Sbjct 9802 TCACCTGAAGAAGTTGCTGTTTGTAACTTAGCTTCAATTGCCTTACCATCATTTGTTGAA 9743 Query 76079 GAAGA-GACTCGCACTTTTG-----ATTATGAAAAACTTCATGAAATCACAAAGATTGTT 76132 |||| || || | || ||| ||| ||| | |||||||| || ||||||||| Sbjct 9742 AAAGATGATGATCATTCATGGTATAATTTTGATAAATTACATGAAATTACCAAGATTGTT 9683 Query 76133 ACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAA 76191 || ||| |||| ||| ||||| | || | |||||| ||| ||| || || Sbjct 9682 ACTCGTAATTTAAATAAAGTTATTGATCGTAACTATTATCCAGTTCCAGA-AGCCAAAAC 9624 Query 76192 GTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT 76251 || || ||| | | ||||| |||| ||||| || |||||| | || |||| ||| || Sbjct 9623 TTCCAACATGAAAAATAGACCAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCATTCAT 9564 Query 76252 TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGA 76311 | | | |||||||||| | ||||||| || | ||| || |||||||| Sbjct 9563 GGCATTAAGATTACCATTTGATTCTCAAGAAGCCAGAGAATTAAATATTCAAATCTTTGA 9504 Query 76312 AACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTA 76371 ||| || ||||| || || |||| | | |||||| || ||| ||||| | || Sbjct 9503 AACTATTTATCATGCTGCCGTGGAAACTTCTATTGAATTAGCCCAAGAAGAAGGTCCTTA 9444 Query 76372 TGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGG 76431 ||| | | | ||||| || || || || || | | || | |||| | | |||| Sbjct 9443 TGAATCTTATCCAGGTTCACCTGCATCTCAGGGTTTATTACAATATGATTTAT-GGAATA 9385 Query 76432 TGAAACCAAGCTCAACTA--CGACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGG 76487 ||||||| || || || || |||||| | ||| || ||| ||| | | | Sbjct 9384 GAAAACCAA-CTGAATTATGGGATTGGGATACCTTAAAGCAAAACATGGCAA--AACATG 9328 Query 76488 GTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 76547 | | | || |||||| | || || |||||||| || || || |||||||||| | Sbjct 9327 GATTAAGAAATTCTCTTTTAGTTGCCCCTATGCCAACTGCTTCAACATCACAAATCTTAG 9268 Query 76548 GTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAG 76607 ||||||||||||| || |||||||| || ||||||| || |||||| || || | Sbjct 9267 GTAATAATGAATGTTTCGAACCATATACTTCAAACATTTATTCAAGAAGAGTTCTTGCTG 9208 Query 76608 GTGAGTT 76614 |||| || Sbjct 9207 GTGAATT 9201 >seq1950 Length=3064 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954 || || ||||| ||||| || | ||||| || | || ||||| ||||||||| |||| Sbjct 636 TTAACTTCAAAATCTTTATCACTATGATTAAATAATACAACTTTAACTTCACCTCTATAA 577 Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014 || | ||||||||| || |||||| |||||||||||| ||||| | || || || Sbjct 576 TCAGCATCAATAACTCCAGCACCAGTAGAAATACCATGCTTGACAGCTAATCCAGAACGA 517 Query 28015 GGTGCAACACGACCATA 28031 || |||||||| ||||| Sbjct 516 GGAGCAACACGGCCATA 500 >seq2231 Length=145420 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||| || ||||| |||| || |||| ||||| ||||| || || ||||| || Sbjct 126212 GGTGCGAAAATCCCTAGAGGGGCAATTCTTTCGGGTCCTCCAGGAACTGGTAAGACTCTT 126271 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || ||| | |||| || |||||| || || || ||| | | || |||| | | Sbjct 126272 CTTGCCAGGGCCACTGCTGGTGAAGCAGGGGTACCTTTCTTTTCTGTT-TCTGGTTCTGA 126330 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||| || |||||||| ||||||||||| | || || || | || ||| || Sbjct 126331 ATTTGTAGAAATGTTTGTGGGTGTGGGTGCATCTCGTGTACGTGACTTATTCAAAACTGC 126390 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGC 175510 || |||||| || | |||||||| ||||||||||||||||| | || |||| Sbjct 126391 TCGTGAAAATGCTCCTTCAATTGTCTTTGTTGATGAGATTGATGCGATTGGGAAGC 126446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596550733486400