Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2193 161 2e-34 seq2023 159 6e-34 >seq2193 Length=52601 Score = 161 bits (178), Expect = 2e-34 Identities = 192/258 (74%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | || | ||| || || | || || ||| || Sbjct 24834 AATTTGCATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTT 24775 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||||||||| |||||| || || ||||| || || |||||||| || | ||||| Sbjct 24774 GTAGTCGGATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTG 24715 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| |||||||| ||||| | || | ||| |||||| || || Sbjct 24714 ATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGA 24655 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT-T 193362 ||| |||||||||| || || || ||||| |||| || || || || ||||||||| | Sbjct 24654 AGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATTGT 24595 Query 193363 TA--TTAGTAAAATAATT 193378 || |||| | |||||| Sbjct 24594 TAATGTAGTTATATAATT 24577 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | || | ||| || || | || || ||| || Sbjct 25062 AATTTGCATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTT 25003 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || |||||| || |||||||| || || || ||||| || | ||||| Sbjct 25002 GTAGTCAGACAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTG 24943 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| ||||| | ||| | || || || || || Sbjct 24942 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGA 24883 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| |||||||||| ||| || || ||||| |||| || || || || |||||||| Sbjct 24882 AGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826 >seq2023 Length=11923 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| | || | || || |||| || || || || ||||| || Sbjct 4141 ACCACCTCTTAATCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 4082 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| |||||| ||| |||||||| || || ||||| |||||||| ||||| ||||| || Sbjct 4081 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4022 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| ||| | ||| |||||| || ||||| ||||| Sbjct 4021 AATACCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAAC 3962 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || ||||| ||||| |||| || || || || ||||||||||| Sbjct 3961 TTCTAAGGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTT 3911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899625948429600