Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 161 2e-34
seq2023 159 6e-34
>seq2193
Length=52601
Score = 161 bits (178), Expect = 2e-34
Identities = 192/258 (74%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | || | ||| || || | || || ||| ||
Sbjct 24834 AATTTGCATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTT 24775
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||||||||| |||||| || || ||||| || || |||||||| || | |||||
Sbjct 24774 GTAGTCGGATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTG 24715
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| |||||||| ||||| | || | ||| |||||| || ||
Sbjct 24714 ATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGA 24655
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT-T 193362
||| |||||||||| || || || ||||| |||| || || || || ||||||||| |
Sbjct 24654 AGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATTGT 24595
Query 193363 TA--TTAGTAAAATAATT 193378
|| |||| | ||||||
Sbjct 24594 TAATGTAGTTATATAATT 24577
Score = 140 bits (154), Expect = 6e-28
Identities = 173/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | || | ||| || || | || || ||| ||
Sbjct 25062 AATTTGCATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTT 25003
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || |||||| || |||||||| || || || ||||| || | |||||
Sbjct 25002 GTAGTCAGACAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTG 24943
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| ||||| || ||||| || ||||| ||||| | ||| | || || || || ||
Sbjct 24942 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGA 24883
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| |||||||||| ||| || || ||||| |||| || || || || ||||||||
Sbjct 24882 AGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
>seq2023
Length=11923
Score = 159 bits (176), Expect = 6e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||| |||| | || | || || |||| || || || || ||||| ||
Sbjct 4141 ACCACCTCTTAATCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGA 4082
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| ||| |||||||| || || ||||| |||||||| ||||| ||||| ||
Sbjct 4081 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4022
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| ||| | ||| |||||| || ||||| |||||
Sbjct 4021 AATACCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAAC 3962
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| || ||||| ||||| |||| || || || || |||||||||||
Sbjct 3961 TTCTAAGGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTT 3911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899625948429600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |