Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 280 3e-70
seq2193 178 2e-39
seq2023 170 3e-37
>seq2332
Length=8947
Score = 280 bits (310), Expect = 3e-70
Identities = 602/910 (66%), Gaps = 40/910 (4%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||||||| | ||||| |||||||| ||||| || ||||||| ||
Sbjct 1316 TTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTT 1257
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATAA 38950
| |||||||||||||||||||| |||||| ||| | | || ||| | || |||
Sbjct 1256 TCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCT-TATTACCAAATGCAACTAA 1198
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
|||||||||||| ||||||||||||||||| |||| |||| || |||||||| |||||
Sbjct 1197 TAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAATAA 1138
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
||| ||||||||||||| | | |||| ||||| || || || |||| ||| ||
Sbjct 1137 ACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATAAT 1078
Query 39071 cataattatattattttttga--taattta-tatttaatatgattcgcatataGTAAACA 39127
| | || | |||| | || | | || ||||||| |||| ||| ||| ||||||
Sbjct 1077 CTT--TTCGACAATTTCTGGATCTGGTCTATTATTTAA-ATGA---GCAAATAATAAACA 1024
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
|||||||| |||||||||||||| || ||| | || |||||||| ||||||||| ||
Sbjct 1023 AGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACC 964
Query 39188 TGGCATT------------------------AATCCTCTCTTTTTAAGCCAAAATATTGA 39223
|||||| || ||||| || || | ||| || || ||
Sbjct 963 TGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGA 904
Query 39224 TGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCC 39283
|||||| | | |||||| ||||| || || ||||| || | || |||| | |
Sbjct 903 TGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGC 844
Query 39284 AAACATTAATTTATCATCTAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGA 39343
| | | | | | ||| |||||| ||| |||||||| |||||| || | ||| |
Sbjct 843 ATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATACA 784
Query 39344 AGGTATATTTTCTATAGCTTTAAATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNN 39403
|| |||| ||| ||||| |||||||| | ||
Sbjct 783 TGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAAGT 724
Query 39404 NNNNNNNNNNNNAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATA 39463
||||| |||| ||||| | | ||| || ||||| || |||
Sbjct 723 ATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCATA 664
Query 39464 AAATTGCCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGA 39523
|||| | ||||| | | |||||||| | | || ||||| |||||| |||
Sbjct 663 AAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATT 604
Query 39524 TACAATACCATCAGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATT 39583
||||||||||||||||| || ||||||||||| || ||| || | | ||||||
Sbjct 603 AACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCATC 544
Query 39584 ATCTTTTAAATTTTC---CCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGT 39640
||| ||||| || || |||| | | ||| || |||||| | |||||| ||
Sbjct 543 ATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAGT 484
Query 39641 CCAAAAAGATGCTACGGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAA- 39699
|||||| |||||| | | ||| || || | ||| | || ||| || | ||| ||||
Sbjct 483 CCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAA 424
Query 39700 -ATAACACAT 39708
|||||| ||
Sbjct 423 CATAACAAAT 414
>seq2193
Length=52601
Score = 178 bits (196), Expect = 2e-39
Identities = 178/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || ||| |||||||||||||| | || || ||| || || ||
Sbjct 24827 ATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCG 24768
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||||| || |||| |||||||| |||||||||||||| || | ||||| || ||
Sbjct 24767 GATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGA 24708
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| |||||| || ||||| ||||| || || |||||
Sbjct 24707 GGAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCA 24648
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||| |||||||| ||||||||||| || || | ||| || ||||||
Sbjct 24647 ACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATT 24597
Score = 163 bits (180), Expect = 5e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || |||||||||||||||| || || || || ||||| ||
Sbjct 25281 ACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGA 25222
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
||||| || |||| |||||||| |||||||| ||||| || | ||||| || || ||
Sbjct 25221 TAAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 25162
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| |||||| || ||||| ||||| || || ||||| ||
Sbjct 25161 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25102
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| ||||||||||| || || | ||| || |||||
Sbjct 25101 TTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || ||| |||||||||||||| | || || ||| || || ||
Sbjct 25055 ATACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCA 24996
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || |||| || ||||| |||||||| ||||| || | ||||| || ||
Sbjct 24995 GACAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGA 24936
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| |||||| ||| || ||| || || || || |||||
Sbjct 24935 GGAATACCTTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCA 24876
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| ||| ||||| ||||||||||| || || | ||| || |||||
Sbjct 24875 ACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
>seq2023
Length=11923
Score = 170 bits (188), Expect = 3e-37
Identities = 181/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || ||| ||||| ||||| |||| || || || ||
Sbjct 4149 TTCTTACCACCACCTCTTAATCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTG 4090
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || ||||||| || | || || ||||| ||||||||||| |||||||| ||||||
Sbjct 4089 TAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGG 4030
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || ||| ||||| ||||| || ||
Sbjct 4029 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAA 3970
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||||| ||||| || ||||||||||| || || | ||| || ||||||||
Sbjct 3969 GATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTT 3911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905107375074000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |