Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq918 150 5e-31
seq2332 116 1e-20
seq2231 107 6e-18
seq1699 107 6e-18
seq750 107 6e-18
seq210 107 6e-18
seq1198 89.7 2e-12
seq2175 86.0 2e-11
>seq918
Length=18345
Score = 150 bits (166), Expect = 5e-31
Identities = 211/296 (71%), Gaps = 0/296 (0%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| ||||| ||||| ||||| || || || |||||||| |||| || ||| || ||||||
Sbjct 10239 TTACCACCTTGATCAACATAACGGGCGGTGTTATTGAAAACACGTACCATGGGGATAATA 10298
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| |||||||| || ||||| ||| ||||| | |||| || |||| ||||||||||
Sbjct 10299 CCGTTGGAAGTACCGTTGGTACCGGCAATATATGCCCCAGTAGAACGAATATTATGAATA 10358
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|||| ||||||||||| | | || ||||| ||| || || | ||||| |
Sbjct 10359 TGTAAACCAATACCACCAGCACTCTTTGAAATCAAAGCACAAGTTTTCAAAGTATCATAG 10418
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|| || ||||| |||||||||| ||| | | || | || ||| | ||| || | |
Sbjct 10419 ATCCCATCAATTGAATCATCTTTCATAGCAACTAAGAAACATGAAGACATTTGTGGACTT 10478
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| || || || || |||| || |||| ||||| | ||| |||| | |||||
Sbjct 10479 GGAGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGAAAAACTTTTGTGACAT 10534
>seq2332
Length=8947
Score = 116 bits (128), Expect = 1e-20
Identities = 350/524 (67%), Gaps = 30/524 (6%)
Strand=Plus/Plus
Query 133072 TAGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGC 133130
||| ||||||||||| ||||||| | | || |||||||| | || || ||| |||
Sbjct 411 TAGATTTGTTATGTTTCCAATTAGATATCATGAAATTTGGCAATTTTACAAGAAAGCAG- 469
Query 133131 AAGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAG 133190
||| | |||||||||| | ||| | |||||| ||||| | | ||| ||
Sbjct 470 AAGCATCATTTTGGACTGCTGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAGAG 529
Query 133191 CCC---TTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGA 133247
| | || ||||||| | | || |||||| | ||||| || ||||||||
Sbjct 530 ATAAATTAAATGATGATGAAAGATACTTCATTTCTCGAGTATTAGCATTCTTTGCTGCAT 589
Query 133248 GTGATGGTATTGTTCTTGAAAATTTA--GGAACACGGTTTATGGGAGAAGTTCAACTGGC 133305
||||||||||||| |||||||||| ||| | ||| | |||||||||| | |
Sbjct 590 CTGATGGTATTGTTAATGAAAATTTAATTGAAAA--TTTTTCAGCAGAAGTTCAAATTCC 647
Query 133306 CGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATA 133365
||||| | |||||||| | || ||| ||| |||||||| ||||| || ||
Sbjct 648 TGAAGCTAAATCATTTTATGGTTTCCAAATTATGATTGAAAATATTCATTCAGAAACTTA 707
Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCA---GAAGC--ACAAACTATTC 133420
||| | ||||||||||||| || || || |||| ||||| | | ||||
Sbjct 708 TTCCCTTTTAATTGATACTTATATTAAGGA-----TCCAAAGGAAGCTGATTACTTATTT 762
Query 133421 AACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAA-ATGGAT 133479
|| || ||| | |||| ||||||| || ||| |||| ||||| ||||| ||||||
Sbjct 763 AATGCTATTGAACATATTCCATGTATTAGAAGAAAAGCTGATTGGGC-ATTAAGATGGAT 821
Query 133480 CCAGGACA---AGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGG 133536
|| | || || | | |||| | | ||||| ||||||| || || ||
Sbjct 822 TACTGATACTGAG-GTCTTA--TATGCTGAAAGATTAGTTGCCTTTGCTGCCGTTGAAGG 878
Query 133537 CAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAA 133579
||||| || ||||| | || ||| |||||||| ||| |||||
Sbjct 879 TATTTTCTTTAGTGGATCATT-TGCATCTATTTTCTGG-TTAAA 920
>seq2231
Length=145420
Score = 107 bits (118), Expect = 6e-18
Identities = 256/383 (67%), Gaps = 13/383 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| ||||| || |||| | ||||||| || || ||||| |||||||| || |
Sbjct 126618 CTGTCAAATCTGCCAGGTCTCATTAATGCCTTATCCAACATATCAGCTCTGTTGGTGCCA 126559
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT- 288968
|| || ||||| | || | | ||| |||||||| ||||| ||||||
Sbjct 126558 GCTAAGACAACGACGTGATCACTGGTATCAAAACCATCCATCTCAACTAAAAGTTGATTC 126499
Query 288969 -AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACC---CGAATCGCTCCttt 289024
||||| | || | ||||| || | ||| |||| || || || | ||| |||
Sbjct 126498 AAAGTGGTC--TCACGCTCATCGTTAGCACCACTTGCATTGCCTTTCGCA-CGCAGCTTC 126442
Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAA 289084
|||| |||||||| || |||| || | | | |||| ||||| | |||
Sbjct 126441 -----CCAATCGCATCAATCTCATCAACAAAGACAATTGAAGGAGCATTTTCACGAGCAG 126387
Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144
|| ||||| || | |||||| ||||| || | ||| ||| ||||||||||||||||||
Sbjct 126386 TTTTGAATAAGTCACGTACACGAGATGCACCCACACCCACAAACATTTCTACAAATTCAG 126327
Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204
|| | || || || ||| | ||| |||||| || || ||||| || ||||| |
Sbjct 126326 AACCAGAAACAGAAAAGAAAGGTACCCCTGCTTCACCAGCAGTGGCCCTGGCAAGAAGAG 126267
Query 289205 TCTTACCTGTTCCAGGTGGTCCC 289227
||||||| ||||| || || |||
Sbjct 126266 TCTTACCAGTTCCTGGAGGACCC 126244
>seq1699
Length=19712
Score = 107 bits (118), Expect = 6e-18
Identities = 108/140 (77%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||||| || ||| |||||||| ||| || || ||| || | |||||| |||
Sbjct 3394 AGAATTTCTTTAAGACGAGGAACACCCAAGGTAACATT---CTTCGAAGAAACACCGGCA 3338
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| ||||||||||| | ||| | |||||||| ||| ||||||||| ||| || ||||
Sbjct 3337 TAATGGAAAGTATTTAAAGTCATTTGAGTAGCTGGTTCACCAATAGATTGAGCAGCAACA 3278
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 3277 ACACCAACCATTTCACCAGG 3258
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| || ||| || ||||||| | || | ||||||||| ||||||||||||||
Sbjct 2636 ATCATAATGAACCATGATATCTTCCAAAGCTTTAACTAAACGACGTTGAATATAACCAGT 2577
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| || ||||| ||||| |||||||| ||||| | | |||| ||||||||||||| ||
Sbjct 2576 TTCAGCGGTTTTAACAGCAGTATCAATAAGACCTTCTCTACCAGCCATAGCATGGAAAAA 2517
Query 302673 TAGCTCTT 302680
| ||||
Sbjct 2516 GAATTCTT 2509
>seq750
Length=34375
Score = 107 bits (118), Expect = 6e-18
Identities = 108/140 (77%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||||| || ||| |||||||| ||| || || ||| || | |||||| |||
Sbjct 32848 AGAATTTCTTTAAGACGAGGAACACCCAAGGTAACATT---CTTCGAAGAAACACCGGCA 32792
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| ||||||||||| | ||| | |||||||| ||| ||||||||| ||| || ||||
Sbjct 32791 TAATGGAAAGTATTTAAAGTCATTTGAGTAGCTGGTTCACCAATAGATTGAGCAGCAACA 32732
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 32731 ACACCAACCATTTCACCAGG 32712
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| || ||| || ||||||| | || | ||||||||| ||||||||||||||
Sbjct 32090 ATCATAATGAACCATGATATCTTCCAAAGCTTTAACTAAACGACGTTGAATATAACCAGT 32031
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| || ||||| ||||| |||||||| ||||| | | |||| ||||||||||||| ||
Sbjct 32030 TTCAGCGGTTTTAACAGCAGTATCAATAAGACCTTCTCTACCAGCCATAGCATGGAAAAA 31971
Query 302673 TAGCTCTT 302680
| ||||
Sbjct 31970 GAATTCTT 31963
>seq210
Length=5409
Score = 107 bits (118), Expect = 6e-18
Identities = 108/140 (77%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||||| || ||| |||||||| ||| || || ||| || | |||||| |||
Sbjct 3394 AGAATTTCTTTAAGACGAGGAACACCCAAGGTAACATT---CTTCGAAGAAACACCGGCA 3338
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| ||||||||||| | ||| | |||||||| ||| ||||||||| ||| || ||||
Sbjct 3337 TAATGGAAAGTATTTAAAGTCATTTGAGTAGCTGGTTCACCAATAGATTGAGCAGCAACA 3278
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 3277 ACACCAACCATTTCACCAGG 3258
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| || ||| || ||||||| | || | ||||||||| ||||||||||||||
Sbjct 2636 ATCATAATGAACCATGATATCTTCCAAAGCTTTAACTAAACGACGTTGAATATAACCAGT 2577
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| || ||||| ||||| |||||||| ||||| | | |||| ||||||||||||| ||
Sbjct 2576 TTCAGCGGTTTTAACAGCAGTATCAATAAGACCTTCTCTACCAGCCATAGCATGGAAAAA 2517
Query 302673 TAGCTCTT 302680
| ||||
Sbjct 2516 GAATTCTT 2509
>seq1198
Length=4729
Score = 89.7 bits (98), Expect = 2e-12
Identities = 108/145 (74%), Gaps = 4/145 (3%)
Strand=Plus/Minus
Query 60203 CCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCAACA 60262
|| ||||||| |||| ||| || ||||| ||||| ||||| |||||||| ||||||| |
Sbjct 2723 CCATTTGGCTTTAATATATTGATATTGTTGGAGCCGACGAAGTTTTGAGCAAGACCAATA 2664
Query 60263 ATAGCACCATTTAA--ACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATATC 60320
|| | | | || | || |||||| ||||||||||| | || ||| || ||||| |
Sbjct 2663 ATTGTCTGAATCAATGATTG--TTCACCATGATGATATCCGGTATTTTCAGATACATAAC 2606
Query 60321 CACTGAATTGTGCGACTTTAATTTC 60345
| ||||| || ||||| |||||
Sbjct 2605 CTGCCAATTGCGCTACTTTGATTTC 2581
>seq2175
Length=31899
Score = 86.0 bits (94), Expect = 2e-11
Identities = 215/325 (66%), Gaps = 4/325 (1%)
Strand=Plus/Plus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||| | |||||| ||||||||||| |||| ||| || | | |||| ||| |
Sbjct 19505 CTTTCTCTACCAATGGCATCAATTTCATCAACGAATATAATGGAAGGAGCCATTTCACGA 19564
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| | ||||| || | ||||| || || |||| || ||| ||||||| || |||
Sbjct 19565 GCTGTCTTGAATAAGTCACGAACACGAGAAGCACCAACCCCTACAAACATTTCCACGAAT 19624
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|| ||| |||| || | |||| ||| |||||| || ||| || | |||| |
Sbjct 19625 TCTGAACCGGAGACACTCAAAAATGGAACACCTGCTTCACCAGCTGTGGCTTTTGCCAAA 19684
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260
||||| ||||| || |||||||| || ||| | | || | || | ||| || |||
Sbjct 19685 AGTGTTTTACCAGTACCAGGTGGACCAGATAAAATTGCACCTCTAGGAATTTTGGCTCCA 19744
Query 289261 GCAGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATT 289318
|| ||| ||||| | || || || || | |||| |||| | ||| | ||
Sbjct 19745 --AGCCTTTCGTATTTTTGTGGATCCTGCAAGAACTTGACAAATTCCATTATTTCTTCTT 19802
Query 289319 TTGCCTCATCACATCCTGCTACATC 289343
| | ||| ||||| || || |||||
Sbjct 19803 TAGACTCCTCACAACCGGCAACATC 19827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471769890112610
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