Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 149 8e-31
seq330 84.2 3e-11
>seq2179
Length=11267
Score = 149 bits (164), Expect = 8e-31
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 172408 TATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTT 172467
||||| || || ||||| |||||| | ||| |||| ||| | |||||| || |||
Sbjct 6577 TATGGTTTGTTGCTGGTTCGACTGATGCCAAATTGTTAAGTGAAAAAGGTGTCAAGATTT 6636
Query 172468 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 172527
|| | | ||||||||||||||||| ||| || | || || ||||| | |||||
Sbjct 6637 GGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGAGAAG 6696
Query 172528 GTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACT 172587
|||||||||| ||| |||||||||| |||||||||||| |||||| | |||| || |
Sbjct 6697 GTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCTGAGTATAAGGATT 6756
Query 172588 GTGATACAGATTACACAGGACAAGGAGTGGACCAATT 172624
||||||| ||||| || || |||||| || |||||
Sbjct 6757 GTGATACTGATTATACCGGTCAAGGATATGATCAATT 6793
>seq330
Length=28712
Score = 84.2 bits (92), Expect = 3e-11
Identities = 171/251 (68%), Gaps = 6/251 (2%)
Strand=Plus/Plus
Query 194590 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 194649
||||| | || |||| |||||| || | || || |||||| ||||||||||||
Sbjct 12254 ATTTTCTTTGGTCCAATTTATTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAC 12313
Query 194650 GCTAGA---AGTCATGGGCAAGTAACTACTTTACATCGACAACCAAATTGTGGTCGTTCT 194706
|| ||| || | || |||| | | ||| ||||||||| ||| | ||
Sbjct 12314 GCAAGAGCAAG--AGGGCCAAG-AGCAGTATTAACCAGACAACCAACCGAAGGTAGATCA 12370
Query 194707 CAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCT 194766
|| ||| ||||| ||||| ||||||||||||| ||| ||| || | | |||||||
Sbjct 12371 AGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATCGCATATGGTGCG 12430
Query 194767 ACTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGC 194826
||||||| ||| |||||| | | | | |||||| | ||| |||| ||| ||||
Sbjct 12431 TCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTGT 12490
Query 194827 ACAGAATGTGG 194837
| |||||||
Sbjct 12491 AATAAATGTGG 12501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632469597516400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |