Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq2179 149 8e-31 seq330 84.2 3e-11 >seq2179 Length=11267 Score = 149 bits (164), Expect = 8e-31 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 172408 TATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTT 172467 ||||| || || ||||| |||||| | ||| |||| ||| | |||||| || ||| Sbjct 6577 TATGGTTTGTTGCTGGTTCGACTGATGCCAAATTGTTAAGTGAAAAAGGTGTCAAGATTT 6636 Query 172468 GGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAG 172527 || | | ||||||||||||||||| ||| || | || || ||||| | ||||| Sbjct 6637 GGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGAGAAG 6696 Query 172528 GTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACT 172587 |||||||||| ||| |||||||||| |||||||||||| |||||| | |||| || | Sbjct 6697 GTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCTGAGTATAAGGATT 6756 Query 172588 GTGATACAGATTACACAGGACAAGGAGTGGACCAATT 172624 ||||||| ||||| || || |||||| || ||||| Sbjct 6757 GTGATACTGATTATACCGGTCAAGGATATGATCAATT 6793 >seq330 Length=28712 Score = 84.2 bits (92), Expect = 3e-11 Identities = 171/251 (68%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 194590 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 194649 ||||| | || |||| |||||| || | || || |||||| |||||||||||| Sbjct 12254 ATTTTCTTTGGTCCAATTTATTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAC 12313 Query 194650 GCTAGA---AGTCATGGGCAAGTAACTACTTTACATCGACAACCAAATTGTGGTCGTTCT 194706 || ||| || | || |||| | | ||| ||||||||| ||| | || Sbjct 12314 GCAAGAGCAAG--AGGGCCAAG-AGCAGTATTAACCAGACAACCAACCGAAGGTAGATCA 12370 Query 194707 CAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCT 194766 || ||| ||||| ||||| ||||||||||||| ||| ||| || | | ||||||| Sbjct 12371 AGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATCGCATATGGTGCG 12430 Query 194767 ACTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGC 194826 ||||||| ||| |||||| | | | | |||||| | ||| |||| ||| |||| Sbjct 12431 TCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTGT 12490 Query 194827 ACAGAATGTGG 194837 | ||||||| Sbjct 12491 AATAAATGTGG 12501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632469597516400