Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 125 6e-24
seq2023 114 1e-20
seq918 89.7 5e-13
>seq2193
Length=52601
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || |||| ||||| || || || | ||||| ||| | |
Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || |||| |||| | ||| || |||||||| ||||| || ||||| |||||
Sbjct 24886 GACACAATCGATAACGTTAAATCTAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGATCA 24944
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||||||||||| || || || || || | || || |||| |||| || || ||
Sbjct 24945 ACAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAA 25004
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||||||| || |||| || || || ||||| | || ||
Sbjct 25005 CATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 25052
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| ||||| | || || |||| ||||| || ||||| | ||||| ||| |
Sbjct 24595 ACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 24654
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || || |||||||| || ||||| || ||||| |||
Sbjct 24655 TCTGACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGAT 24714
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|||||||||||||| ||||| || || || |||| || |||| | || || ||
Sbjct 24715 CAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGACTAC 24774
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||||||||| || |||| || || || ||||| | || ||
Sbjct 24775 AACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24824
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || |||| ||||| || ||||| | ||||| ||| | |
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||||||||| ||||| || ||||| ||||||
Sbjct 25114 GACACTATTGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCAA 25173
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| || || || || || |||| || |||| | || ||||| |||
Sbjct 25174 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAAC 25233
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || |||| || || ||| ||||
Sbjct 25234 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATT 25271
>seq2023
Length=11923
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || |||| ||||| |||||||| | ||||| ||| | |
Sbjct 3914 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 3973
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||||||||| ||||| || || || || |||
Sbjct 3974 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 4033
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || |||||||| || || || | || ||| |||| | || || || |||
Sbjct 4034 CAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 4093
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || ||||||| || || ||||
Sbjct 4094 ATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATT 4131
>seq918
Length=18345
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/155 (74%), Gaps = 4/155 (3%)
Strand=Plus/Plus
Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCG 139137
||| || |||| ||| || || || ||||| || || | || ||||| ||||||||
Sbjct 9764 AATTGAAGCTAAGTTACAAACAGCAACTTCTTCAGGT--GATGAATATTCAACAATTTCA 9821
Query 139138 GCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAA 139197
||| ||||| | || || |||||||||| | ||||||| | ||| ||||||||
Sbjct 9822 CAACATAAATTGGATGATTTAATAATACCTAAATTCTTTTGATTGGTCTTTTGGTTACAA 9881
Query 139198 GCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232
|||||||| || | |||| | || || ||||||||
Sbjct 9882 GCATCTTTATATAACATAAATGGAGTACCAGTTTC 9916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449883371988400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |