Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq2023 127 2e-24
seq2193 120 2e-22
>seq2023
Length=11923
Score = 127 bits (140), Expect = 2e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||| ||||| ||||| || || | | || | | ||| || | ||| || |||
Sbjct 4110 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 4051
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709
||| | || |||||||| || || || |||||||| || |||||||| | || ||||
Sbjct 4050 GCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTG 3991
Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769
||| | || | |||||||||| ||| ||||| | || ||||| || |||||||||||
Sbjct 3990 ACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGGTC 3931
Query 29770 TTAACAAATATCTGCATTTT 29789
|| || || || ||||||||
Sbjct 3930 TTGACGAAAATTTGCATTTT 3911
>seq2193
Length=52601
Score = 120 bits (132), Expect = 2e-22
Identities = 167/233 (72%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | | || ||||| | |||||||| ||||||||||| || || |
Sbjct 24824 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 24765
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||| | ||| ||||| || |||
Sbjct 24764 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 24705
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | ||| |||||| | || | |||||||||| ||| |||
Sbjct 24704 ATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 24645
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT-TTAA 29791
|| | || || || || |||||||| || || || || || |||||| ||||
Sbjct 24644 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATTGTTAA 24592
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | | || ||||| | |||||||| ||||||||||| || || |
Sbjct 25052 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 24993
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || ||||| | ||||| | ||| ||||| || |||
Sbjct 24992 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 24933
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || | ||| || | ||||||||| ||| ||
Sbjct 24932 ATACCTTCCTTGTCTTG-AATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAAC 24874
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||| || || || ||||||||||| || || || || |||||
Sbjct 24873 TTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615
||| || || || || | || || ||||| | || ||||| ||||| ||||| |||||
Sbjct 25284 TTGACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATC 25225
Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675
| | || | | || || | ||| || ||||| | ||||| | ||| ||||| ||
Sbjct 25224 GGATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGG 25165
Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735
|||||||| || |||||||| | ||| |||||| | || | |||||||||| |||
Sbjct 25164 AGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTC 25105
Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| | || || || || ||||||||||| || || || || |||||
Sbjct 25104 AACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385207322006730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |