Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 118 1e-21
>seq2179
Length=11267
Score = 118 bits (130), Expect = 1e-21
Identities = 221/317 (70%), Gaps = 6/317 (2%)
Strand=Plus/Plus
Query 180464 AATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTA 180523
|| ||||||| ||| | ||||| || | ||| | | ||||||||| ||| | | |||
Sbjct 6606 AAATTGTTAAGTGAAAAAGGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTG 6665
Query 180524 GATTCTTGTGGATTTCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAA 180583
|| || ||||| | ||| ||||||||||||||| ||| |||||||||| |||
Sbjct 6666 GACAATTTGGGATTAACTGATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAA 6725
Query 180584 TGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGG-TAT 180642
||||||||| || ||| | |||| || |||||||| | |||| ||| ||||| |||
Sbjct 6726 TGGAGACATTTTGGGGCTGAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATAT 6785
Query 180643 AGACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCCCGAATG-CCGAAGAATAA 180701
|| ||||| | | || ||| ||| || || | || ||| | | ||||||| |
Sbjct 6786 -GATCAATTGCACGACGTGATA-AAAAAATTGAAGACAAACCCTTACGATAGAAGAATTA 6843
Query 180702 TCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCACTGT- 180760
| || | |||||| | | || || | |||||||||||||||||||| |||
Sbjct 6844 TTATGTCTGCTTGGAACCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCA-TGTA 6902
Query 180761 TTGGTACAATTTTATGT 180777
|| ||||| |||||
Sbjct 6903 TTCTGCCAATTCTATGT 6919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655259276770000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |