Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq2179 118 1e-21 >seq2179 Length=11267 Score = 118 bits (130), Expect = 1e-21 Identities = 221/317 (70%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 180464 AATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTA 180523 || ||||||| ||| | ||||| || | ||| | | ||||||||| ||| | | ||| Sbjct 6606 AAATTGTTAAGTGAAAAAGGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTG 6665 Query 180524 GATTCTTGTGGATTTCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAA 180583 || || ||||| | ||| ||||||||||||||| ||| |||||||||| ||| Sbjct 6666 GACAATTTGGGATTAACTGATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAA 6725 Query 180584 TGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGG-TAT 180642 ||||||||| || ||| | |||| || |||||||| | |||| ||| ||||| ||| Sbjct 6726 TGGAGACATTTTGGGGCTGAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATAT 6785 Query 180643 AGACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCCCGAATG-CCGAAGAATAA 180701 || ||||| | | || ||| ||| || || | || ||| | | ||||||| | Sbjct 6786 -GATCAATTGCACGACGTGATA-AAAAAATTGAAGACAAACCCTTACGATAGAAGAATTA 6843 Query 180702 TCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCACTGT- 180760 | || | |||||| | | || || | |||||||||||||||||||| ||| Sbjct 6844 TTATGTCTGCTTGGAACCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCA-TGTA 6902 Query 180761 TTGGTACAATTTTATGT 180777 || ||||| ||||| Sbjct 6903 TTCTGCCAATTCTATGT 6919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655259276770000