Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq2179 152 6e-32 seq330 87.8 2e-12 seq1699 84.2 3e-11 seq750 84.2 3e-11 seq210 84.2 3e-11 >seq2179 Length=11267 Score = 152 bits (168), Expect = 6e-32 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 171603 TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGA 171662 |||| || | || || ||||| || || ||||| |||||| | ||| |||| ||| Sbjct 6560 TATCATTCATGAGCTCCTATGGTTTGTTGCTGGTTCGACTGATGCCAAATTGTTAAGTGA 6619 Query 171663 TATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTT 171722 | |||||| || ||||| | | ||||||||||||||||| ||| || | || || Sbjct 6620 AAAAGGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATT 6679 Query 171723 TACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGG 171782 ||||| | ||||||||||||||||||| |||||||||| |||||||||||| || Sbjct 6680 AACTGATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGG 6739 Query 171783 GGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATT 171836 |||| | |||| || ||| |||| ||||| || || |||||| || ||||| Sbjct 6740 GGCTGAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATT 6793 >seq330 Length=28712 Score = 87.8 bits (96), Expect = 2e-12 Identities = 173/252 (69%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406 ||||| | || |||| |||||| || | || || |||||| |||||||||||| Sbjct 12254 ATTTTCTTTGGTCCAATTTATTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAC 12313 Query 193407 GCTAGA---AGTCATGGGCAAGTG-ACTACTTTACATCGACAACCAAATTGTGGTCGTTC 193462 || ||| || | || |||| | | || | || ||||||||| ||| | || Sbjct 12314 GCAAGAGCAAG--AGGGCCAAGAGCAGTATTAACCA--GACAACCAACCGAAGGTAGATC 12369 Query 193463 TCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGC 193522 || ||| ||||| ||||| ||||||||||||| ||| ||| || | | ||||||| Sbjct 12370 AAGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATCGCATATGGTGC 12429 Query 193523 TACTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 193582 ||||||| ||| |||||| | | | | |||||| | ||| |||| ||| |||| Sbjct 12430 GTCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTG 12489 Query 193583 CACAGAATGTGG 193594 | ||||||| Sbjct 12490 TAATAAATGTGG 12501 >seq1699 Length=19712 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361 ||| || | || ||||| |||| |||| || |||| ||| | ||||| || | ||| Sbjct 1371 GTTGAACGTCATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACAT 1430 Query 50362 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 50417 ||| || ||| || | || |||||| || ||| ||| || | | | Sbjct 1431 AAAATGTCGATGATGGCACA----TAGAGTTAAGGTTATGCCATATTCAACTTTCAGATT 1486 Query 50418 GAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 50477 |||||| | | ||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct 1487 AAATTTATCGGTTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACA 1546 Query 50478 TGTTCCTCAATC 50489 |||||| ||||| Sbjct 1547 TGTTCCACAATC 1558 >seq750 Length=34375 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361 ||| || | || ||||| |||| |||| || |||| ||| | ||||| || | ||| Sbjct 30825 GTTGAACGTCATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACAT 30884 Query 50362 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 50417 ||| || ||| || | || |||||| || ||| ||| || | | | Sbjct 30885 AAAATGTCGATGATGGCACA----TAGAGTTAAGGTTATGCCATATTCAACTTTCAGATT 30940 Query 50418 GAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 50477 |||||| | | ||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct 30941 AAATTTATCGGTTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACA 31000 Query 50478 TGTTCCTCAATC 50489 |||||| ||||| Sbjct 31001 TGTTCCACAATC 31012 >seq210 Length=5409 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361 ||| || | || ||||| |||| |||| || |||| ||| | ||||| || | ||| Sbjct 1371 GTTGAACGTCATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACAT 1430 Query 50362 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 50417 ||| || ||| || | || |||||| || ||| ||| || | | | Sbjct 1431 AAAATGTCGATGATGGCACA----TAGAGTTAAGGTTATGCCATATTCAACTTTCAGATT 1486 Query 50418 GAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 50477 |||||| | | ||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct 1487 AAATTTATCGGTTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACA 1546 Query 50478 TGTTCCTCAATC 50489 |||||| ||||| Sbjct 1547 TGTTCCACAATC 1558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628511322700800