Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 152 6e-32
seq330 87.8 2e-12
seq1699 84.2 3e-11
seq750 84.2 3e-11
seq210 84.2 3e-11
>seq2179
Length=11267
Score = 152 bits (168), Expect = 6e-32
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 171603 TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGA 171662
|||| || | || || ||||| || || ||||| |||||| | ||| |||| |||
Sbjct 6560 TATCATTCATGAGCTCCTATGGTTTGTTGCTGGTTCGACTGATGCCAAATTGTTAAGTGA 6619
Query 171663 TATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTT 171722
| |||||| || ||||| | | ||||||||||||||||| ||| || | || ||
Sbjct 6620 AAAAGGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATT 6679
Query 171723 TACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGG 171782
||||| | ||||||||||||||||||| |||||||||| |||||||||||| ||
Sbjct 6680 AACTGATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGG 6739
Query 171783 GGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATT 171836
|||| | |||| || ||| |||| ||||| || || |||||| || |||||
Sbjct 6740 GGCTGAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATT 6793
>seq330
Length=28712
Score = 87.8 bits (96), Expect = 2e-12
Identities = 173/252 (69%), Gaps = 8/252 (3%)
Strand=Plus/Plus
Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406
||||| | || |||| |||||| || | || || |||||| ||||||||||||
Sbjct 12254 ATTTTCTTTGGTCCAATTTATTATCAAAAATTGAAGCATATGGTTTTGGATAAAATGCAC 12313
Query 193407 GCTAGA---AGTCATGGGCAAGTG-ACTACTTTACATCGACAACCAAATTGTGGTCGTTC 193462
|| ||| || | || |||| | | || | || ||||||||| ||| | ||
Sbjct 12314 GCAAGAGCAAG--AGGGCCAAGAGCAGTATTAACCA--GACAACCAACCGAAGGTAGATC 12369
Query 193463 TCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGC 193522
|| ||| ||||| ||||| ||||||||||||| ||| ||| || | | |||||||
Sbjct 12370 AAGAGATGGTGGTTTGAGATTGGGAGAAATGGAAAGAGATTGTGTTATCGCATATGGTGC 12429
Query 193523 TACTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 193582
||||||| ||| |||||| | | | | |||||| | ||| |||| ||| ||||
Sbjct 12430 GTCTCAATTGTTATTGGAAAGATTAATGATATCATCTGATGCATTTGAAGTTGATATTTG 12489
Query 193583 CACAGAATGTGG 193594
| |||||||
Sbjct 12490 TAATAAATGTGG 12501
>seq1699
Length=19712
Score = 84.2 bits (92), Expect = 3e-11
Identities = 134/192 (70%), Gaps = 8/192 (4%)
Strand=Plus/Plus
Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361
||| || | || ||||| |||| |||| || |||| ||| | ||||| || | |||
Sbjct 1371 GTTGAACGTCATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACAT 1430
Query 50362 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 50417
||| || ||| || | || |||||| || ||| ||| || | | |
Sbjct 1431 AAAATGTCGATGATGGCACA----TAGAGTTAAGGTTATGCCATATTCAACTTTCAGATT 1486
Query 50418 GAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 50477
|||||| | | ||| |||||||||||||||| ||||| |||||||||||||||||
Sbjct 1487 AAATTTATCGGTTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACA 1546
Query 50478 TGTTCCTCAATC 50489
|||||| |||||
Sbjct 1547 TGTTCCACAATC 1558
>seq750
Length=34375
Score = 84.2 bits (92), Expect = 3e-11
Identities = 134/192 (70%), Gaps = 8/192 (4%)
Strand=Plus/Plus
Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361
||| || | || ||||| |||| |||| || |||| ||| | ||||| || | |||
Sbjct 30825 GTTGAACGTCATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACAT 30884
Query 50362 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 50417
||| || ||| || | || |||||| || ||| ||| || | | |
Sbjct 30885 AAAATGTCGATGATGGCACA----TAGAGTTAAGGTTATGCCATATTCAACTTTCAGATT 30940
Query 50418 GAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 50477
|||||| | | ||| |||||||||||||||| ||||| |||||||||||||||||
Sbjct 30941 AAATTTATCGGTTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACA 31000
Query 50478 TGTTCCTCAATC 50489
|||||| |||||
Sbjct 31001 TGTTCCACAATC 31012
>seq210
Length=5409
Score = 84.2 bits (92), Expect = 3e-11
Identities = 134/192 (70%), Gaps = 8/192 (4%)
Strand=Plus/Plus
Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361
||| || | || ||||| |||| |||| || |||| ||| | ||||| || | |||
Sbjct 1371 GTTGAACGTCATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACAT 1430
Query 50362 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 50417
||| || ||| || | || |||||| || ||| ||| || | | |
Sbjct 1431 AAAATGTCGATGATGGCACA----TAGAGTTAAGGTTATGCCATATTCAACTTTCAGATT 1486
Query 50418 GAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 50477
|||||| | | ||| |||||||||||||||| ||||| |||||||||||||||||
Sbjct 1487 AAATTTATCGGTTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACA 1546
Query 50478 TGTTCCTCAATC 50489
|||||| |||||
Sbjct 1547 TGTTCCACAATC 1558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628511322700800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |