Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2193 120 3e-22 >seq2193 Length=52601 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || |||| ||| | ||| |||||||| | |||||||| ||||| |||||||||||| Sbjct 25283 TGACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCG 25224 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | || || |||||| | ||| |||||||| | |||| |||||| ||||| ||| Sbjct 25223 GATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGA 25164 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || || ||||| ||||| ||||| || | | || | ||||| | | ||| Sbjct 25163 GGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCA 25104 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| | || | ||||| || || || || || ||||| ||||||||| Sbjct 25103 ACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATA 25053 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259 ||||||||||| | || ||||| ||||| |||||||| || || || || |||| Sbjct 25037 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCT 24978 Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319 || | ||| |||||||| | |||| |||||| ||||| ||||| || ||||| ||||| Sbjct 24977 TCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 24918 Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379 |||||| ||| | | || | ||||| | | ||| ||||| | ||| | ||| Sbjct 24917 TGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTC 24858 Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || || || || || ||||| ||||||||| Sbjct 24857 TTACCAGTTAAGGTCTTGACGAAAATTTGCATA 24825 Score = 105 bits (116), Expect = 7e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259 ||||||||||| | || ||||| ||||| |||||||| ||| | || || |||| Sbjct 24809 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCGTCT 24750 Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319 || | ||| ||||||||| | |||| |||||| ||||| ||||| || ||||| || || Sbjct 24749 TCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCT 24690 Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379 ||||| || | | || | ||||| | | ||| ||||| | || | ||| Sbjct 24689 TGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTC 24630 Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGT 137420 || || || || || || ||||| |||||||| | | |||| Sbjct 24629 TTACCAGTTAAAGTCTTGACGAAGATTTGCATTGTTAATGT 24589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488528549796000