Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq918 266 8e-66 seq330 154 3e-32 seq908 127 5e-24 seq2332 113 1e-19 seq1699 113 1e-19 seq750 113 1e-19 seq210 113 1e-19 seq1198 111 4e-19 seq2244 105 2e-17 seq1904 98.7 2e-15 seq2450 87.8 4e-12 >seq918 Length=18345 Score = 266 bits (294), Expect = 8e-66 Identities = 583/865 (67%), Gaps = 15/865 (2%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| || ||||| ||| | ||| | |||||||| | | || ||||| | | | Sbjct 10678 TATTTCGGGTTCAAGACTTTGGAAAGATCTTATTTATTAAGAGTTAATGGTAAAGTTGCT 10619 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | || ||||| | | | | || || |||||||||||||| ||||||| Sbjct 10618 GAAAGACCACAACATTTAATCATGAGAGTGGCCATTGGTATTCATGGTAATGATATCCCT 10559 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCA----TGCTACTCC 110479 |||||||||| |||| || || | || | || ||| | |||| || | | || Sbjct 10558 CGAGTTATTGAATCTTATAAT--ATGATGTCACAA--AAGTTTTTCACTCATGGTTCACC 10503 Query 110480 TACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAA 110538 || ||||||| || || ||| | |||| || |||| || |||||| | | | Sbjct 10502 AACTTTATTTAATGCCGGTACTCCAAGTCCACAAATGTCTTCATG-TTTCTTAGTTGCTA 10444 Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTA 110598 | || |||||||| ||||| || || |||||| || | ||| |||| | ||||| | Sbjct 10443 TGAAAGATGATTCAATTGATGGGATCTATGATACTTTGAAAACTTGTGCTTTGATTTCAA 10384 Query 110599 AAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCG 110658 | | |||| || |||||| | || ||||| ||||||| || | || ||| |||| | Sbjct 10383 AGAGTGCTGGTGGTATTGGTTTACATATTCATAATATTCGTTCTACTGGGGCATATATTG 10324 Query 110659 CAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTG 110718 | | || ||| |||| | || || | || ||| || | || ||||| |||| | Sbjct 10323 CCGGTACCAACGGTACTTCCAACGGTATTATCCCCATGGTACGTGTTTTCAATAACACCG 10264 Query 110719 CAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAAC 110775 | ||||| ||||||||||||| |||| || ||||||| | ||| | |||| Sbjct 10263 CCCGTTATGTTGATCAAGGTGGTAATAAGAGACCAGGAGCATTTGCCCTTTATTTAGAAC 10204 Query 110776 CTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835 | |||||||||||||| ||||| || | || || | ||||||||||| |||||| Sbjct 10203 CATGGCATTCAGATATTTTTGATTTTATTGATATTAGAAAAAATCAAGGTAAAGAAGAAA 10144 Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895 ||||| | |||||||| ||| | |||||| | |||||||| ||||| | || Sbjct 10143 TTAGAGCCAGAGATTTATTCCCAGCATTATGGATTCCTGATTTATTTATGAAGAGAGTGG 10084 Query 110896 AAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955 || ||||||| ||| | | | | ||| || ||||||| || ||||||| | Sbjct 10083 AACAAAATGGTGATTGGACATTATTTTCCCCTAATGAAGCTCCTGGGTTACCTGATGTTT 10024 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAA 111014 |||| | || |||||| | | || |||||||||||| ||||| | | | |||| Sbjct 10023 ATGGTGATGAATTTGAACAATTATATGAAAAATATGAACGTGAAGGTCGTGGTAGACAAA 9964 Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 | ||| || ||| || | |||| ||| | ||| | ||| ||||||||| ||| Sbjct 9963 C-CATTAAGGCACAAAAATTATGGTATTCCATCTTGGAAGCCCAAACTGAAACTGGTACT 9905 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || | ||| || ||||||||| | ||| | || | ||||||| ||||||||| | Sbjct 9904 CCATTTATGTTATATAAAGATGCTTGTAACCAAAAGACCAATCAAAAGAATTTAGGTATT 9845 Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159 ||||| || ||||| || |||| Sbjct 9844 ATTAAATCATCCAATTTATGTTGTG 9820 Score = 84.2 bits (92), Expect = 5e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 112588 TTATTACACGTAACCTAAATAAAATTATTGA-CAAAACGACCTATCCAATTCAAAAAGCA 112646 || |||| ||||| |||||||| ||||||| | ||| | |||||| ||| | |||| Sbjct 9687 TTGTTACTCGTAATTTAAATAAAGTTATTGATCGTAACTAT-TATCCAGTTCCAGAAGCC 9629 Query 112647 AAACATTCTAATAACAAGCATAGACCAATTGGCATTGGCGTACAAGGATTAGCTGATGTA 112706 ||| ||| || | || |||||||||||| | | || |||||||| || ||||||| | Sbjct 9628 AAAACTTCCAACATGAAAAATAGACCAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCA 9569 Query 112707 TTTATGATGATGCGAATTCCTTTTGATTCT 112736 || ||| | || | || ||||||||| Sbjct 9568 TTCATGGCATTAAGATTACCATTTGATTCT 9539 >seq330 Length=28712 Score = 154 bits (170), Expect = 3e-32 Identities = 299/438 (68%), Gaps = 5/438 (1%) Strand=Plus/Plus Query 110467 TTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCT 110526 |||||||| | || || ||| || ||||||| |||| | || ||||||| | Sbjct 5276 TTCATGCTTCACCAACTTTATACAATGCAGGAAGTAATTTTAATTACTTATCTTCTTG-T 5334 Query 110527 TTCTT-CTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT 110585 ||||| || | || || || || || ||||| || ||||| | | ||| | || || Sbjct 5335 TTCTTACTTGCTATGAAGGAAGACTCAATTGATGGGATTTACAAAACGCTTCATGAGACA 5394 Query 110586 GCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAA 110645 || | ||||| ||| ||| || || |||||| |||| |||||||| ||||| | | Sbjct 5395 GCATTGATTTCCAAAGCCTCCGGTGGTATTGGTGTTCATGTTCATGACATTCGTGCCAGT 5454 Query 110646 GGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTC 110705 ||| || ||||||| | || || || ||| | ||||||||| | | || Sbjct 5455 GGATCATTCATCGCAAGCACAAACGGAAAGTCTGGCGGATTGGTTCCAATGCTCCGCGTG 5514 Query 110706 TTCAACGACACTGCAAAATATGTGAATCAA---GGTGGTAAGAGAAATGGCTCATTTGCT 110762 || || |||| |||| |||||| ||||| |||||||| | || |||| ||| Sbjct 5515 TTTAATAACACGGCAAGATATGTAGATCAAGGTGGTGGTAAACGCCCGGGGGCATTCGCT 5574 Query 110763 ATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAA 110822 || ||| | || ||||||||| ||||| ||||| | ||||| | | |||||||| Sbjct 5575 ATATATATAGAGCCTTGGCATGGTGATATCTTTGATATTTTAGATATGAGAAAAAATCAT 5634 Query 110823 GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTC 110882 || |||||| || ||| | | |||||||| |||| | | ||| || | |||||||| Sbjct 5635 GGCAATGAAGAGCACAGAACCAGGGATTTATTCTATGGATTATGGGTTCCTGATTTATTT 5694 Query 110883 ATGAAACGTGTTCAAGAA 110900 |||| || || ||||| Sbjct 5695 ATGAGGCGAGTCAAAGAA 5712 >seq908 Length=70704 Score = 127 bits (140), Expect = 5e-24 Identities = 204/292 (70%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 167636 aaaaaCATCGATGAAACTTTTCCAGATTTTTATCG-AACCA--CGTCGTTTGCATTCATC 167692 ||||||||| |||||| ||||||| | |||| | || | | |||||| |||||||| Sbjct 34424 AAAAACATCAATGAAATTTTTCCAAAGTTTTCTATTAATTAATCTTCGTTTACATTCATC 34483 Query 167693 GTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTAT 167752 ||||| ||||| | | | |||| || |||| |||||||||||||| | || | Sbjct 34484 ATAAAATCCATAAATTTTAGTTATATTTGCTGATTCATGATTTCCTCTTAACATAAAGAA 34543 Query 167753 GTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAAC 167812 || | | | || || |||||||| |||||||||||||| |||||| Sbjct 34544 ATTTTCTGGATATTTAATTTTATAACATAATAATAATAAAATTGTTTCTAAAGATTTATA 34603 Query 167813 ACCTCTATCAACATAATCACCTAAAAATATATATTTATTTTGGTTTGAAGGATTATCTA- 167871 |||||||||||||||||| || | ||||| ||| |||| | | |||| |||| | Sbjct 34604 ACCTCTATCAACATAATCTCCAAGAAATAAATA---ATTTGTATAAGGAGGA-TATCCAC 34659 Query 167872 GTTTTTTAAAAATATTCAATAAATCACTAAATTGACCATGTAAATCACCTAC 167923 |||||||| | ||||||| |||||| ||||| | |||||| || Sbjct 34660 AACAATTAAAAATTCGAATTAAATCATGAAATTGTCCATGAATATCACCCAC 34711 >seq2332 Length=8947 Score = 113 bits (124), Expect = 1e-19 Identities = 345/521 (66%), Gaps = 17/521 (3%) Strand=Plus/Plus Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494 |||||||||| | |||| || ||| | | || |||||| | | || | || ||| Sbjct 424 TTTCCAATTAGATATCATGAAATTTGGCAATTTTACAAGAAAGCAGAAGCATCATTTTGG 483 Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGG---GAAAAATTAACCTTG 131551 |||| |||||| || ||| | | |||||| | |||||||| || ||||||| || Sbjct 484 ACTGCTGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAGAGATAAATTAAA--TG 541 Query 131552 A--ATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTG 131609 | |||||| | | || |||| ||| | |||||||| || | | |||||| |||| Sbjct 542 ATGATGAAAGATACTTCATTTCTCGAGTATTAGCATTCTTTGCTGCATCTGATGGTATTG 601 Query 131610 TTATTGAAAATCTTGTTATTAATTTCATTCA--AGAAATTGATATTCCTGAAGTAACATC 131667 ||| ||||||| | || ||||| |||| |||| || | |||||||||| | ||| Sbjct 602 TTAATGAAAATTTAATTGAAAATTT--TTCAGCAGAAGTTCAAATTCCTGAAGCTAAATC 659 Query 131668 GTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGAT 131727 || || || ||| ||||| ||||||| || | ||||| | || || Sbjct 660 ATTTTATGGTTTCCAAATTATGATTGAAAATATTCATTCAGAAACTTATTCCCTTTTAAT 719 Query 131728 TGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTA-AATAAAT 131786 ||| | | | |||| || | | || || | |||||| ||||| | || | || Sbjct 720 TGATACTTATATTAAGGATCCAAAGGAAGCTGATTACTTATTTAATGCTATTGAACATAT 779 Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAA-ATGGATTCAAGATGATTCCG-C 131844 | | || | ||| || ||||| || ||||| ||||| ||||||| ||| | | | Sbjct 780 TCCATGTA-TTAGAAGAAAAGCTGATTGGGC-ATTAAGATGGATTACTGATACTGAGGTC 837 Query 131845 TAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGC 131904 | || | || |||| | || || |||||| ||||||||||| |||||| || | Sbjct 838 TTATATG-CTGAAAGATTAGTTGCCTTTGCTGCCGTTGAAGGTATTTTCTTTAGTGGATC 896 Query 131905 TTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGC 131945 || |||| || ||| | ||||| | || ||||||| Sbjct 897 ATTTGCATCTATTTTCTGGTTAAAGAAAAGAGGTTTGATGC 937 >seq1699 Length=19712 Score = 113 bits (124), Expect = 1e-19 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| || ||||| ||| | || ||| | ||||| ||| | ||||||||||| Sbjct 1380 CATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACATAAAATGTCG 1439 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTAAGTG 305426 |||||||| |||| ||| || || ||| | ||| | |||| |||||||| || | Sbjct 1440 ATGATGGCACATAGAGTTAAGGT--TATGCCATATTCAACTTTCAGATTAAATTTATCGG 1497 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | | | || |||||||| ||||| ||||| |||||||||||| | ||||| || |||| Sbjct 1498 TTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACATGTTCCACAAT 1557 Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526 | | |||| | |||||||| |||| ||| |||| Sbjct 1558 CTCCAGAAACAAGATCAGAATTATCTCAAATTTGTGCTGT 1597 Score = 87.8 bits (96), Expect = 4e-12 Identities = 177/253 (70%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT 304945 ||||| | ||| | ||||||| ||||||||||| || || ||| || || | Sbjct 963 TTACAGTTCCATGTGGCAACATATATGGATAATGATATCGCAGGACAACCACAAGCTCTT 1022 Query 304946 CAAAGATCTGGCAGACCT-TTAAAGGGTATTAG-GCAACGCATTAAAGGTAAAGAGGGTC 305003 |||| | | || | || ||||| | || || |||| | | ||||||||||| ||| Sbjct 1023 CAAAAAACAGGACGTCCAATTAAATCG-ATCAGAGCAA-GATTGAAAGGTAAAGAAGGTA 1080 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACAC 305063 | | |||||||| ||||||| ||||||||||||||| ||| | | ||| || | Sbjct 1081 GATTAAGAGGTAATTTAATGGGTAAACGTGTTGATTTTTCTGCTCGTACTGTTATTTCTG 1140 Query 305064 CTGATTCTCAAATTAG-TCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAAC-- 305120 |||| || || |||| | | || || | || ||||||||| |||||| ||||| Sbjct 1141 GTGATCCT-AATTTAGATTTAGATCAAGTTGGTGTTCCAATTTCAATTGC--GAAAACTT 1197 Query 305121 TAACATTTCCAGA 305133 |||||| |||||| Sbjct 1198 TAACATATCCAGA 1210 >seq750 Length=34375 Score = 113 bits (124), Expect = 1e-19 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| || ||||| ||| | || ||| | ||||| ||| | ||||||||||| Sbjct 30834 CATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACATAAAATGTCG 30893 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTAAGTG 305426 |||||||| |||| ||| || || ||| | ||| | |||| |||||||| || | Sbjct 30894 ATGATGGCACATAGAGTTAAGGT--TATGCCATATTCAACTTTCAGATTAAATTTATCGG 30951 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | | | || |||||||| ||||| ||||| |||||||||||| | ||||| || |||| Sbjct 30952 TTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACATGTTCCACAAT 31011 Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526 | | |||| | |||||||| |||| ||| |||| Sbjct 31012 CTCCAGAAACAAGATCAGAATTATCTCAAATTTGTGCTGT 31051 Score = 87.8 bits (96), Expect = 4e-12 Identities = 177/253 (70%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT 304945 ||||| | ||| | ||||||| ||||||||||| || || ||| || || | Sbjct 30417 TTACAGTTCCATGTGGCAACATATATGGATAATGATATCGCAGGACAACCACAAGCTCTT 30476 Query 304946 CAAAGATCTGGCAGACCT-TTAAAGGGTATTAG-GCAACGCATTAAAGGTAAAGAGGGTC 305003 |||| | | || | || ||||| | || || |||| | | ||||||||||| ||| Sbjct 30477 CAAAAAACAGGACGTCCAATTAAATCG-ATCAGAGCAA-GATTGAAAGGTAAAGAAGGTA 30534 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACAC 305063 | | |||||||| ||||||| ||||||||||||||| ||| | | ||| || | Sbjct 30535 GATTAAGAGGTAATTTAATGGGTAAACGTGTTGATTTTTCTGCTCGTACTGTTATTTCTG 30594 Query 305064 CTGATTCTCAAATTAG-TCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAAC-- 305120 |||| || || |||| | | || || | || ||||||||| |||||| ||||| Sbjct 30595 GTGATCCT-AATTTAGATTTAGATCAAGTTGGTGTTCCAATTTCAATTGC--GAAAACTT 30651 Query 305121 TAACATTTCCAGA 305133 |||||| |||||| Sbjct 30652 TAACATATCCAGA 30664 >seq210 Length=5409 Score = 113 bits (124), Expect = 1e-19 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| || ||||| ||| | || ||| | ||||| ||| | ||||||||||| Sbjct 1380 CATTTGATGGATGATGATCCAGTTTTATTTAATCGTCAACCTTCATTACATAAAATGTCG 1439 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTAAGTG 305426 |||||||| |||| ||| || || ||| | ||| | |||| |||||||| || | Sbjct 1440 ATGATGGCACATAGAGTTAAGGT--TATGCCATATTCAACTTTCAGATTAAATTTATCGG 1497 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | | | || |||||||| ||||| ||||| |||||||||||| | ||||| || |||| Sbjct 1498 TTACTTCTCCATATAATGCTGATTTCGATGGTGATGAAATGAATTTACATGTTCCACAAT 1557 Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526 | | |||| | |||||||| |||| ||| |||| Sbjct 1558 CTCCAGAAACAAGATCAGAATTATCTCAAATTTGTGCTGT 1597 Score = 87.8 bits (96), Expect = 4e-12 Identities = 177/253 (70%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT 304945 ||||| | ||| | ||||||| ||||||||||| || || ||| || || | Sbjct 963 TTACAGTTCCATGTGGCAACATATATGGATAATGATATCGCAGGACAACCACAAGCTCTT 1022 Query 304946 CAAAGATCTGGCAGACCT-TTAAAGGGTATTAG-GCAACGCATTAAAGGTAAAGAGGGTC 305003 |||| | | || | || ||||| | || || |||| | | ||||||||||| ||| Sbjct 1023 CAAAAAACAGGACGTCCAATTAAATCG-ATCAGAGCAA-GATTGAAAGGTAAAGAAGGTA 1080 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACAC 305063 | | |||||||| ||||||| ||||||||||||||| ||| | | ||| || | Sbjct 1081 GATTAAGAGGTAATTTAATGGGTAAACGTGTTGATTTTTCTGCTCGTACTGTTATTTCTG 1140 Query 305064 CTGATTCTCAAATTAG-TCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAAC-- 305120 |||| || || |||| | | || || | || ||||||||| |||||| ||||| Sbjct 1141 GTGATCCT-AATTTAGATTTAGATCAAGTTGGTGTTCCAATTTCAATTGC--GAAAACTT 1197 Query 305121 TAACATTTCCAGA 305133 |||||| |||||| Sbjct 1198 TAACATATCCAGA 1210 >seq1198 Length=4729 Score = 111 bits (122), Expect = 4e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 278138 GTTAAAAATGACGGGCCTGGTATTGATATTGCAATGCATCCTAAGGAAAACAAGTACACA 278197 |||| ||||| ||| |||||| ||| ||| ||| | || ||||| | ||| | Sbjct 685 GTTATGAATGATGGGAAAGGTATTCCGGTTGAAATTCATACCAAAGAAAATATGTATATT 744 Query 278198 GTTGAAATGATATTTGGGAATTTATTGACATCTACTAATTACAAGGAAGATGAAGAGCGA 278257 ||| |||| ||||| ||||||||||| ||| ||||||| | || |||||| || | Sbjct 745 CCAGAATTGATTTTTGGTAATTTATTGACTTCTTCTAATTATGATGATGATGAAAAGAAA 804 Query 278258 CTCACAGGAGGCAAAAATGGATATGGGGCAAAGCTGACAAATATCTTCTCAA-AATGCTT 278316 |||| || || | |||||| ||||| || || | ||||| ||||||| ||| || Sbjct 805 GTCACTGGTGGTAGAAATGGTTATGGTGCTAAATTATGTAATATTTTCTCAACTATG-TT 863 Query 278317 TGAAGTTGAAACTGTTGATAAAAAGACT 278344 |||||||||||||| |||| ||| ||| Sbjct 864 TGAAGTTGAAACTGCTGATTTAAATACT 891 >seq2244 Length=40149 Score = 105 bits (116), Expect = 2e-17 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 || || || ||||| || || ||| |||||| | |||| || || | ||| | | |||| Sbjct 11080 GTCCTATTTAATAGACAGCCTTCATTGCATAGATTGTCCATTTTGTCACATTATGCCAAA 11021 Query 305390 GTATTATC-TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGA 305448 | | |||| ||||| || || |||| | ||| |||||| ||||||||||| || Sbjct 11020 ATCCGTCCATGGAGA-ACATTCCGTTTGAATGAATGTGTTTGTACACCTTATAATGCCGA 10962 Query 305449 TTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 |||||||||||||||||||||| ||||||| || ||| Sbjct 10961 TTTTGATGGAGATGAAATGAATTTGCATGTTCCACAA 10925 >seq1904 Length=31465 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 167250 CCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTACGA 167309 || ||||||||||||||| ||||||||| ||||| |||| || ||||||| | Sbjct 28920 CCGGCATTATCGAATTCACCACAATAATTTGGAGCTGAGAATAATGTGACTAATTGTCTT 28979 Query 167310 TTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353 || |||| ||||||||||||||||||||||||| ||| ||||| Sbjct 28980 TTTGAAAAGAATTCATAACCATCTTCAACAACTTGATGAGCACG 29023 >seq2450 Length=23230 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/191 (72%), Gaps = 10/191 (5%) Strand=Plus/Minus Query 305301 TTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATA 305360 |||| |||||| | || | |||||| ||| | | ||| | ||||| || |||||| Sbjct 11043 TTAT-AGACATATTAAGAATAATGATGTTGTTATTATGAATCGTCAACCTACATTGCATA 10985 Query 305361 AAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGG---ATTGACATTTCGATTAA 305417 || || ||||||| |||||| || | ||| || |||| | |||||| |||| Sbjct 10984 AAGCTTCCATGATGGGTCATAAGGTTAGAGTTTTGCCTGGTGAAAAGACATTGAGATTGC 10925 Query 305418 ATGTAAGTGCTTGTACGC---CTTATAATGCGGATTTTGATGGAGATGAAATGAATATGC 305474 || || ||| ||| |||||||||| ||||||||||| |||||||||||||||| Sbjct 10924 AT-TA--TGCCAATACCGGTGCTTATAATGCCGATTTTGATGGTGATGAAATGAATATGC 10868 Query 305475 ATGTACCTCAA 305485 || | || ||| Sbjct 10867 ATTTTCCACAA 10857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186774328721330