Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 118 9e-22
seq2023 114 1e-20
>seq2193
Length=52601
Score = 118 bits (130), Expect = 9e-22
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||| || || || || ||||| |||||||||||| | ||| ||| |
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | | || || ||||| ||||| ||||| | || ||||||
Sbjct 25114 GACACTATTGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCAA 25173
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | |||| || || || ||||| ||||| || |||| | ||||||||||
Sbjct 25174 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAAC 25233
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAATGAT 106494
|| ||||| |||||||| |||||||||| ||||| ||| |||| || ||| ||
Sbjct 25234 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGGTCAATAAT 25288
Score = 100 bits (110), Expect = 2e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 106254 TTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAA 106313
|||| ||||||||| || || || || || ||||| |||||||||||| | ||| |||
Sbjct 24592 TTAACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAA 24651
Query 106314 CCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTT 106373
| || || ||| | | || || ||||| || || ||||| | ||
Sbjct 24652 TCTTCTGACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCA 24711
Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGAT 106433
||||||||| | | |||| ||| || || ||||| ||||| || |||| | |||
Sbjct 24712 GATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGAC 24771
Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||||||| ||||| ||||| || |||||||||| || || || |||| ||
Sbjct 24772 TACAACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24824
>seq2023
Length=11923
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
||||||||||||||| || || || || ||||| ||||| |||||| | ||| ||| |
Sbjct 3910 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 3969
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
|| || ||| | | || ||| || || ||||| ||||| | || |||
Sbjct 3970 TTCTGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4029
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435
|||||||| | || | ||| || || |||||||||||| || |||| | || ||
Sbjct 4030 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 4089
Query 106436 CAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||||| ||||| |||||||| |||| ||||| || || ||| |||| ||
Sbjct 4090 CAACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 4140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402317194418240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |