Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 93.3 4e-14
>seq2193
Length=52601
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC-TCATGTTGCGCTCGTC 27094
|| || |||||||| || || || |||||||| ||||||||| | | ||| | ||||
Sbjct 24809 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTAC-CGTC 24751
Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154
||| | || ||||| || |||| | ||| |||||||| || || | ||| || |||||
Sbjct 24750 TTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATC 24691
Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214
||| || || | | || | |||||| | | ||||||||||| || || |
Sbjct 24690 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGT 24631
Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || | ||| || || |||||||||||
Sbjct 24630 CTTACCAGTTAAAGTCTTGACGAAGATTTGCAT 24598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095
|| || |||||||| || || || |||||||| |||||||| || | | |||||
Sbjct 25037 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCT 24978
Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155
|| | || ||||| ||| |||| | ||| |||||||| || || | ||| || || ||
Sbjct 24977 TCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 24918
Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215
|| || ||| | | | || | ||||| | | ||||||||||| ||| || |
Sbjct 24917 TGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTC 24858
Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || | || || || || |||||||||
Sbjct 24857 TTACCAGTTAAGGTCTTGACGAAAATTTGCATA 24825
Score = 87.8 bits (96), Expect = 2e-12
Identities = 164/237 (69%), Gaps = 3/237 (1%)
Strand=Plus/Minus
Query 27014 ATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGT 27072
||||||| || || | || | ||| || |||||||| ||||| || ||||| || ||||
Sbjct 25288 ATTATTGACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGT 25229
Query 27073 AGTCGC-TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131
| ||| | | ||| | ||||||| | || ||||| ||| |||| | ||| ||||||
Sbjct 25228 AATCGGATAAAGTTCTAC-CGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGA 25170
Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191
|| || || | ||| || || || ||| || || | | || | |||||| |
Sbjct 25169 TCTGGAGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAA 25110
Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| ||||||||||| || || | || || || | || || || || |||||||||
Sbjct 25109 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATA 25053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424921297413360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |