Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2193 93.3 4e-14 >seq2193 Length=52601 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC-TCATGTTGCGCTCGTC 27094 || || |||||||| || || || |||||||| ||||||||| | | ||| | |||| Sbjct 24809 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTAC-CGTC 24751 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | || ||||| || |||| | ||| |||||||| || || | ||| || ||||| Sbjct 24750 TTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATC 24691 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 ||| || || | | || | |||||| | | ||||||||||| || || | Sbjct 24690 TTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGT 24631 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || | ||| || || ||||||||||| Sbjct 24630 CTTACCAGTTAAAGTCTTGACGAAGATTTGCAT 24598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 || || |||||||| || || || |||||||| |||||||| || | | ||||| Sbjct 25037 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCT 24978 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | || ||||| ||| |||| | ||| |||||||| || || | ||| || || || Sbjct 24977 TCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 24918 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 || || ||| | | | || | ||||| | | ||||||||||| ||| || | Sbjct 24917 TGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTC 24858 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || | || || || || ||||||||| Sbjct 24857 TTACCAGTTAAGGTCTTGACGAAAATTTGCATA 24825 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 27014 ATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGT 27072 ||||||| || || | || | ||| || |||||||| ||||| || ||||| || |||| Sbjct 25288 ATTATTGACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGT 25229 Query 27073 AGTCGC-TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 | ||| | | ||| | ||||||| | || ||||| ||| |||| | ||| |||||| Sbjct 25228 AATCGGATAAAGTTCTAC-CGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGA 25170 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 || || || | ||| || || || ||| || || | | || | |||||| | Sbjct 25169 TCTGGAGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAA 25110 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||||||||| || || | || || || | || || || || ||||||||| Sbjct 25109 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATA 25053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921297413360