Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq918 158 2e-33
seq1950 98.7 1e-15
seq2231 95.1 2e-14
>seq918
Length=18345
Score = 158 bits (174), Expect = 2e-33
Identities = 477/727 (66%), Gaps = 16/727 (2%)
Strand=Plus/Plus
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
|| ||||| || || |||||| || ||||||| || |||||||| || ||||||
Sbjct 9201 AATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCA 9260
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|||||||| |||||||||| || || || |||||||| || || | |||||| ||
Sbjct 9261 TTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTT 9320
Query 110801 CGAAGACCCTTCTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTT 110856
| | || | | ||| ||| || ||| | |||||| || || || || ||
Sbjct 9321 CTTAATCCATGTT--TTGCCATGTTTTGCTTTAAGGTATCCCAATCCCATAATTCAG-TT 9377
Query 110857 GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916
||||| |||| | | ||| | || | | || || || || || ||||| | |
Sbjct 9378 GGTTTTCTATTCC-ATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATA 9436
Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 110976
| |||||| | ||||| ||| || |||||| | |||| || || |||||
Sbjct 9437 AGATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATA 9496
Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCG 111036
|| ||||||||||| || ||| | || ||||||| | |||||||||| | |
Sbjct 9497 AATAGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGGTAATCT 9556
Query 111037 GCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCAT 111096
| || ||| |||| || | |||||| || ||||| |||| ||||| | | |||
Sbjct 9557 TAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCAT 9616
Query 111097 ATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155
|| || || || ||| ||| |||||| | || | ||||| ||| |||| ||
Sbjct 9617 GTTGGAAGTTTTGGCT-TCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAAT 9675
Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGT 111210
| ||||||||||| || |||||||| | ||| ||| ||| || | || |
Sbjct 9676 TACGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCAT 9735
Query 111211 C-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
| |||| | ||| | ||| | ||| ||||| || || || |||||||| || |
Sbjct 9736 CATCTTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCTT 9795
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
| || || || | |||||| |||||| ||||| ||||| | || ||||
Sbjct 9796 CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAAT 9855
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
||||||| || |||| | ||| || ||||| || || | ||| | || || || || |
Sbjct 9856 TCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTT 9915
Query 111390 CCGTCTG 111396
| || ||
Sbjct 9916 CAGTTTG 9922
>seq1950
Length=3064
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
||||| |||||||| || || || || | ||||| |||||||||||| ||||||
Sbjct 500 TATGGCCGTGTTGCTCCTCGTTCTGGATTAGCTGTCAAGCATGGTATTTCTACTGGTGCT 559
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|| ||||||||| | || |||| ||||||||| ||||| || | || ||||| | ||
Sbjct 560 GGAGTTATTGATGCTGATTATAGAGGTGAAGTTAAAGTTGTATTATTTAATCATAGTGAT 619
Query 164724 AAAGACTTTGAGGTAAA 164740
||||| ||||| || ||
Sbjct 620 AAAGATTTTGAAGTTAA 636
>seq2231
Length=145420
Score = 95.1 bits (104), Expect = 2e-14
Identities = 164/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 11619 GCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGA 11678
|||| || | ||||||||||||||||| |||||||| | || |||||| || ||
Sbjct 126446 GCTTCCCAATCGCATCAATCTCATCAACAAAGACAATTGAAGGAGCATTTTCACGAGCAG 126387
Query 11679 TTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG 11738
||| || | || || || | ||||||||||| |||||||| || ||||| | |
Sbjct 126386 TTTTGAATAAGTCACGTACACGAGATGCACCCACACCCACAAACATTTCTACAAATTCAG 126327
Query 11739 CGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGG 11797
|||| || | | ||| || || || |||||| || |||| | ||| || ||
Sbjct 126326 AACCAGA-AACAGAAAAGAAAGGTACCCCTGCTTCACCAGCAGTGGCCCTGGCAAGAAGA 126268
Query 11798 GTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
||||| || || ||||| ||||| |||| || |||| ||||| || |||||
Sbjct 126267 GTCTTACCAGTTCCTGGAGGACCCGAAAGAATTGCCCCTCTAGGGATTTTCGCACC 126212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628012138488000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |