Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq918 136 5e-27
seq2231 109 6e-19
seq2175 87.8 2e-12
>seq918
Length=18345
Score = 136 bits (150), Expect = 5e-27
Identities = 886/1411 (63%), Gaps = 29/1411 (2%)
Strand=Plus/Minus
Query 104216 GAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273
|||| ||||| |||| | ||||| | |||||||| ||||||||||| | || ||
Sbjct 10618 GAAAGACCACA--ACATTTAATCATGAGAGTGGCCATTGGTATTCATGGTAATGATATCC 10561
Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAA 104333
| || | || | || | | |||||| ||| | |||| ||| | ||||||
Sbjct 10560 CTCGAGTTATTGAATCTTATAATATGATGTCACAAAAGTTTTTCACTCATGGTTCACCAA 10501
Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393
| | || ||||| ||||| ||||| || |||||||| || ||| | | || | |
Sbjct 10500 CTTTATTTAATGCCGGTACTCCAAGTCCACAAATGTCTTCATGTTTCTTAGTTGCTATGA 10441
Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453
| || || ||||| | || ||||||| ||| | | ||||| || ||||||
Sbjct 10440 AAGATGATTCAATTGATGGGATCTATGATACTTTGAAAACTTGTGCTTTGATTTCAAAGA 10381
Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513
| ||||| |||||||| | || || ||| || | | | | | | |||| |
Sbjct 10380 GTGCTGGTGGTATTGGTTTACATATTCATAATATTCGTTCTACTGGGGCATATATTGCCG 10321
Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573
| || || ||| || | |||||||| || ||| | || || || || ||| || |
Sbjct 10320 GTACCAACGGTACTTCCAACGGTATTATCCCCATGGTACGTGTTTTCAATAACACCGCCC 10261
Query 104574 GCTATGTAAATCAAGCTGGGCGTC---GAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630
| ||||| |||||| ||| | || ||| | | || | ||| | || ||||
Sbjct 10260 GTTATGTTGATCAAGGTGGTAATAAGAGACCAGGAGCATTTGCCCTTTATTTAGAACCAT 10201
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| | ||||| | || || |||| | | || |||||| | || ||
Sbjct 10200 GGCATTCAGATATTTTTGATTTTATTGATATTAGAAAAAATCAAGGTAAAGAAGAAATTA 10141
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| | | ||| | ||| | || | |||||||| ||| | || ||||||||||| ||
Sbjct 10140 GAGCCAGAGATTTATTCCCAGCATTATGGATTCCTGATTTATTTATGAAGAGAGTGGAAC 10081
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
| | ||| ||||| | | |||| || | | || ||||| | | |||| |
Sbjct 10080 AAAATGGTGATTGGACATTATTTTCCCCTAATGAAGCTCCTGGGTTACCTGATGTTTATG 10021
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
|||| || |||||| | || ||| || || |||||||| | | ||
Sbjct 10020 GTGATGAATTTGAACAATTATATGAAAAATATGAACGTGAAGGTCGTGGTAGACAAACCA 9961
Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| || | | ||| | | || | | | ||||| || |||||||| ||||
Sbjct 9960 TTAAGGCACAAAAATTATGGTATTCCATCTTGGAAGCCCAAACTGAAACTGGTACTCCAT 9901
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
||| | || ||||| || ||||||||||||| |||||||||||||| ||| | || |
Sbjct 9900 TTATGTTATATAAAGATGCTTGTAACCAAAAGACCAATCAAAAGAATTTAGGTATTATTA 9841
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
| |||||| | ||| ||||| | |||| | || || || ||||| |
Sbjct 9840 AATCATCCAATTTATGTTGTGAAATTGTTGAATATTCATCACCTGAAGAAGTTGCTGTTT 9781
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CATT---- 105105
||||| | || ||||| || | || | ||| || | ||| | || ||||
Sbjct 9780 GTAACTTAGCTTCAATTGCCTTACCATCATTTGTTGA--AAAAGATGATGATCATTCATG 9723
Query 105106 ---TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162
| ||| ||| ||| | || ||| |||| || | ||| || || |||| | |||
Sbjct 9722 GTATAATTTTGATAAATTACATGAAATTACCAAGATTGTTACTCGTAATTTAAATAAAGT 9663
Query 105163 TATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221
||||||| | || | ||| || ||| ||| || | || || |||| | | | |
Sbjct 9662 TATTGATCGTAACTATTATCCAGTTCCAGA-AGCCAAAACTTCCAACATGAAAAATAGAC 9604
Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 105280
|||||| | || || || ||| | || |||| |||||| | || || |||||
Sbjct 9603 CAATTGCCTTGGGGGTACAAGGTTTGGCTGATGCATTCATGGCATTAAGATTAC-CATTT 9545
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
||||| | ||||| | ||| | ||| | || ||||| || || ||||| || ||
Sbjct 9544 GATTCTCAAGAAGCCAGAGAATTAAATATTCAAATCTTTGAAACTATTTATCATGCTGCC 9485
Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
| || | | || || || | | || ||||| |||||| | | | |||||
Sbjct 9484 GTGGAAACTTCTATTGAATTAGCCCAAGAAGAAGGTCCTTATGAATCTTATCCAGGTTCA 9425
Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA- 105459
|| || || || || | | |||| |||| | | |||| | ||||| || | ||
Sbjct 9424 CCTGCATCTCAGGGTTTATTACAATATGATTTAT-GGAATAGAAAACCAA-CTGAATTAT 9367
Query 105460 -CGACTGGGAAGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
|| ||||| | | ||| || ||| ||| | | || | | || ||| |
Sbjct 9366 GGGATTGGGATACCTTAAAGCAAAACATGGCAA--AACATGGATTAAGAAATTCTCTTTT 9309
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576
| || || |||||||| || || || |||||||||| |||||||||||||| || ||
Sbjct 9308 AGTTGCCCCTATGCCAACTGCTTCAACATCACAAATCTTAGGTAATAATGAATGTTTCGA 9249
Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGA 105607
||| || || | ||||| ||| ||||||
Sbjct 9248 ACCATATACTTCAAACATTTATTCAAGAAGA 9218
>seq2231
Length=145420
Score = 109 bits (120), Expect = 6e-19
Identities = 220/328 (67%), Gaps = 15/328 (5%)
Strand=Plus/Minus
Query 9609 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9668
||||||||||||||||||| |||||||| || | ||| || || ||||| || |
Sbjct 126533 TATCAAAACCATCCATCTCAACTAAAAGTTGATTCAAAGTGGTCTCACGCTCATCGTTAG 126474
Query 9669 CTGGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAA 9719
| ||||| ||| ||| || |||| || | ||||||||||||||||
Sbjct 126473 C------ACCACTTGCATTGCCTTTCGCACGCAGCTTCCCAATCGCATCAATCTCATCAA 126420
Query 9720 TGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGG 9779
||||| || | || |||||| ||||| || || | || |||||||| |
Sbjct 126419 CAAAGACAATTGAAGGAGCATTTTCACGAGCAGTTTTGAATAAGTCACGTACACGAGATG 126360
Query 9780 CGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACAT 9839
| |||||||| |||||||| || ||||| | | | ||| | ||| || ||
Sbjct 126359 CACCCACACCCACAAACATTTCTACAAATTCAGAACCAGAAACAGAAAAGAAAGGTACCC 126300
Query 9840 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9899
| |||||| ||| |||| | ||| |||||||||||||| || ||||| ||||| |
Sbjct 126299 CTGCTTCACCAGCAGTGGCCCTGGCAAGAAGAGTCTTACCAGTTCCTGGAGGACCCGAAA 126240
Query 9900 GGAGGGCACCTCGTGGAATCTTGGCGCC 9927
| | || |||| || || || || ||
Sbjct 126239 GAATTGCCCCTCTAGGGATTTTCGCACC 126212
>seq2175
Length=31899
Score = 87.8 bits (96), Expect = 2e-12
Identities = 268/407 (66%), Gaps = 8/407 (2%)
Strand=Plus/Plus
Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585
|||||| | ||||| | ||| | ||| | || | |||||| ||||| || | ||
Sbjct 19342 ATCAAATCTTCCTGGTCTAAGCAACGCCTTGTCCAAAATATCAGGACGATTAGTACCTGC 19401
Query 9586 GATGACAACAATACCTGTTT--CATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643
| ||||||| | || | | ||||||||||||||| || ||| | ||||||
Sbjct 19402 CAAAACAACAACA--TGATCACCCGAATCAAAACCATCCATTTCAACCAACAATTGGTTC 19459
Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 9703
| || | ||| ||||| ||||| || || | ||| || | || | || | |
Sbjct 19460 AATGTATTTTCACGTTCGTCATTTCCTCCAATTCTTCCATTACCTCTTTCTCTACCAATG 19519
Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAG 9762
|||||||| ||||||| ||| | ||| | || |||| ||||| | ||| || ||
Sbjct 19520 GCATCAATTTCATCAACGAATATAATGGAAGGAGCCATTTCACGAGCTGTCTTGAATAAG 19579
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821
|| || ||||| || || || || |||||||| ||||| || | || |||| ||
Sbjct 19580 -TCACGAACACGAGAAGCACCAACCCCTACAAACATTTCCACGAATTCTGAACCGGAGAC 19638
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
| | | || || ||| | |||||| || ||||| || | ||| || ||||| |
Sbjct 19639 ACT-CAAAAATGGAACACCTGCTTCACCAGCTGTGGCTTTTGCCAAAAGTGTTTTACCAG 19697
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928
|||| || ||| | | | ||||||| ||||| ||||| |||
Sbjct 19698 TACCAGGTGGACCAGATAAAATTGCACCTCTAGGAATTTTGGCTCCA 19744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583242354377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |