Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1198 111 7e-20 >seq1198 Length=4729 Score = 111 bits (122), Expect = 7e-20 Identities = 171/241 (71%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 65027 GTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCA---GTT 65083 || |||| ||| | || ||| ||||||||||| ||| | | |||| ||| | Sbjct 2801 GTGATTTCATTGATTTCAGTGAAAATATATCTTGCGGCGGAGAAATCTTTACCACCAGCA 2742 Query 65084 CGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAA 65143 || | |||||| |||||||||| |||||| ||| |||||||| || || | || Sbjct 2741 GCACGAGAACCAAACGAACCATTTGGCTTTAATATATTGATATTGTTGGAGCCGACGAAG 2682 Query 65144 TTCTGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGA 65202 || ||||| | || ||||||| ||| || | | | |||||| ||||||||||| | Sbjct 2681 TTTTGAGCAAGACCAATAATTGTCTGAATCAATGATTG-TTCACCATGATGATATCCGGT 2623 Query 65203 ATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTT 65262 || |||||| ||||| || ||||| || ||||| ||||| || |||| ||| |||| Sbjct 2622 ATTTTCAGATACATAACCTGCCAATTGCGCTACTTTGATTTCACTTCTTAATTTCCTTTT 2563 Query 65263 A 65263 | Sbjct 2562 A 2562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235672732954500