Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 145 7e-30
>seq2193
Length=52601
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| | || || ||| | ||||| | ||||| ||| | ||
Sbjct 24598 ATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 24657
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||||| ||||| || ||||| || || || ||||||
Sbjct 24658 GACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 24717
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | || || || |||||||||||| || || | ||||| ||||||
Sbjct 24718 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGACTACAAC 24777
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| || || |||||||| ||||| | ||| | ||||| ||
Sbjct 24778 ATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGGTAT 24827
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || | || || ||| | ||||| | ||||| ||| | ||
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||||| |||||||| ||||| || || || ||||||
Sbjct 25114 GACACTATTGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCAA 25173
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || || |||||||||||| || || | ||||||||||||
Sbjct 25174 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAAC 25233
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || |||||||| || ||| | || | |||||
Sbjct 25234 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 25280
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || | || || ||| | || ||| | ||||| ||| | ||
Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| |||||||||||||| ||||| || || || ||||||
Sbjct 24886 GACACAATCGATAACGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 24945
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || || ||||| |||||| || || | || || ||||||
Sbjct 24946 CAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAAC 25005
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| || || |||||||| ||||| | ||| | ||||| ||
Sbjct 25006 ATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGGTAT 25055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434904645705600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |