Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 96.9 3e-15
>seq2179
Length=11267
Score = 96.9 bits (106), Expect = 3e-15
Identities = 199/296 (67%), Gaps = 0/296 (0%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| || ||||| ||||| | | | || ||||| || | | ||||||| ||| || |
Sbjct 6624 GGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACT 6683
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
||| || || || || || || || || || ||||| |||||||| ||||||||
Sbjct 6684 GATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCT 6743
Query 34442 GAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTG 34501
|||||| || | || | || ||| | || || ||| || || |||| |||||
Sbjct 6744 GAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATTGCACGACGTG 6803
Query 34502 ATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCG 34561
|| | | |||||| |||||| | || ||||| || | |||| || |||||||||
Sbjct 6804 ATAAAAAAATTGAAGACAAACCCTTACGATAGAAGAATTATTATGTCTGCTTGGAACCCG 6863
Query 34562 AAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617
||| | | |||||| || || || || || ||||||||||||| ||
Sbjct 6864 CCTGATTTTGCAAAGATGGCTCTTCCACCATGTCATGTATTCTGCCAATTCTATGT 6919
Score = 96.9 bits (106), Expect = 3e-15
Identities = 199/296 (67%), Gaps = 0/296 (0%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787
|| ||||||||||||| || || || || || |||||| | | ||| ||||
Sbjct 6919 ACATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGCGGG 6860
Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847
||||| || |||| | || ||||| || | |||||| |||||| | | ||||||
Sbjct 6859 TTCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCACG 6800
Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907
| |||| || || ||| || || | ||| || | || | || |||||| |||
Sbjct 6799 TCGTGCAATTGATCATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAGCC 6740
Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGG 6967
||||| |||||||| ||||| || || || || || || || || || ||| |
Sbjct 6739 CCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAGTT 6680
Query 6968 AACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
|| ||| ||||||| | | || ||||| || | | | ||||| ||||| || ||
Sbjct 6679 AATCCCAAATTGTCCAAATATTCACGAGAACCATTACCCTCCCAAATCTTGACACC 6624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448248223701600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |