Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2179 96.9 3e-15 >seq2179 Length=11267 Score = 96.9 bits (106), Expect = 3e-15 Identities = 199/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || || ||||| ||||| | | | || ||||| || | | ||||||| ||| || | Sbjct 6624 GGTGTCAAGATTTGGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACT 6683 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 ||| || || || || || || || || || ||||| |||||||| |||||||| Sbjct 6684 GATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCT 6743 Query 34442 GAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTG 34501 |||||| || | || | || ||| | || || ||| || || |||| ||||| Sbjct 6744 GAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATTGCACGACGTG 6803 Query 34502 ATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCG 34561 || | | |||||| |||||| | || ||||| || | |||| || ||||||||| Sbjct 6804 ATAAAAAAATTGAAGACAAACCCTTACGATAGAAGAATTATTATGTCTGCTTGGAACCCG 6863 Query 34562 AAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 ||| | | |||||| || || || || || ||||||||||||| || Sbjct 6864 CCTGATTTTGCAAAGATGGCTCTTCCACCATGTCATGTATTCTGCCAATTCTATGT 6919 Score = 96.9 bits (106), Expect = 3e-15 Identities = 199/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || ||||||||||||| || || || || || |||||| | | ||| |||| Sbjct 6919 ACATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGCGGG 6860 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 ||||| || |||| | || ||||| || | |||||| |||||| | | |||||| Sbjct 6859 TTCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCACG 6800 Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907 | |||| || || ||| || || | ||| || | || | || |||||| ||| Sbjct 6799 TCGTGCAATTGATCATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAGCC 6740 Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGG 6967 ||||| |||||||| ||||| || || || || || || || || || ||| | Sbjct 6739 CCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAGTT 6680 Query 6968 AACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 || ||| ||||||| | | || ||||| || | | | ||||| ||||| || || Sbjct 6679 AATCCCAAATTGTCCAAATATTCACGAGAACCATTACCCTCCCAAATCTTGACACC 6624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448248223701600