Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2193 86.0 4e-12 >seq2193 Length=52601 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || || || | ||||| || ||||| | || || ||| | Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | ||||| ||||| ||||| ||||| |||||| |||| || | Sbjct 25114 GACACTATTGACAAT--GTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATC 25171 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || ||||| || || || |||||||| |||| | | || |||||||||| Sbjct 25172 AACAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACA 25231 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||||||||| || ||||| ||||| || ||| Sbjct 25232 ACATCCAAAAGGAATCTACTTTACATTTAGTCTTG 25266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355851427205310