Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 152 3e-32
>seq2193
Length=52601
Score = 152 bits (168), Expect = 3e-32
Identities = 182/242 (75%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 23599 TAATTAC-TTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCG 23656
||| ||| |||| |||||| || ||||| || || | || || || || || || | |
Sbjct 24584 TAACTACATTAACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAG 24643
Query 23657 AAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGT 23715
||||||| || | |||||| |||| ||| | || | |||| | || || ||||||
Sbjct 24644 AAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCTAAAA-TCCAAGATAAGGAAGGT 24702
Query 23716 GTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT 23775
| || ||||||||||| ||||| || ||||| || || ||| ||||||||| | |||
Sbjct 24703 ATTCCTCCAGATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACT 24762
Query 23776 TTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGA 23835
||| ||| |||||||| ||||| || ||||| ||||||||||||||||| ||| ||||
Sbjct 24763 TTATCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGT 24822
Query 23836 GG 23837
||
Sbjct 24823 GG 24824
Score = 152 bits (168), Expect = 3e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| || ||| | || || || || |||||| | |||||||| || |
Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || ||||| | |||| || ||||| |||||| | || ||||||||
Sbjct 24886 GACACAATCGATAACGTTAAATCTAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATCA 24944
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || || || || ||| | ||||||| | ||||| || |||||
Sbjct 24945 ACAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAA 25004
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| || ||||| ||||||||||||||||| ||| |||| ||
Sbjct 25005 CATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 25052
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| || ||| | || || || || || || | |||||||| || |
Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | || | |||| | ||||| |||||| | || ||||||||
Sbjct 25114 GACACTATTGACAATGTCAAGTCTAAAA-TCCAAGACAAGGAAGGTATTCCTCCAGATCA 25172
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || || || || ||| ||||||||| | |||||| |||||||||
Sbjct 25173 ACAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAA 25232
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| || || || ||||||||||| || || || |||| ||
Sbjct 25233 CATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 25280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337999177685240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |