Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 345 4e-90
>seq2332
Length=8947
Score = 345 bits (382), Expect = 4e-90
Identities = 632/921 (69%), Gaps = 39/921 (4%)
Strand=Plus/Minus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| ||||| || || || |||| |||||| || || |||||||| || ||||
Sbjct 1326 AACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAA 1267
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTG--CGTTGTAATGTTTTTCACACTTT 4364
||||||||||||||||||||||| ||||| ||| | || || ||| | |
Sbjct 1266 TGAAATATTTTCCATAAAATCAAATGGATT--TTGAACATTATAGACTTTCTTATTACCA 1209
Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424
| || || | |||| || || |||||||| | ||| || | ||| | || | |||
Sbjct 1208 AATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTC 1149
Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484
|| || | ||| || || |||| || | || ||| | || | ||| ||| || |||
Sbjct 1148 ATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCT 1089
Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544
|| || || | || | | ||| | |||| |||| ||| | |||| |||
Sbjct 1088 TCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATGAGCAAATAAT 1029
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| ||||||||| ||| |||||||| ||||| | ||| | ||| || ||||| |||
Sbjct 1028 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTT 969
Query 4605 AATCCGGGCATT------------------------AAACCTCTCTTTTTAAGCCAAAAT 4640
|| || ||||| |||||||| || || | ||| ||
Sbjct 968 AAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAA 909
Query 4641 ATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-G 4699
|||| |||||||| ||| |||||| || ||||| ||||| ||||| || |||||||
Sbjct 908 ATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTT 849
Query 4700 GGACCCGA-ACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCT 4758
| | | | || || | | || |||||||| |||||||||| | ||||||| |
Sbjct 848 TCAGCATATAAGACCT--CAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTC 791
Query 4759 TAACGCACGGAAT-TGTGTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGA 4817
||| || ||||| ||| | ||||| |||||||| | | ||| ||| || | |
Sbjct 790 TAATACATGGAATATGT-TCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTA 732
Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877
|||||||| || |||| ||| ||| |||| ||||| |||||||| || ||| ||
Sbjct 731 ATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGG 672
Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC-GTTACAAAATCTTTCTACTAA 4936
|| || ||||| || ||||||| | | ||||||||| | | ||||| |||| | |||
Sbjct 671 AAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAAT-TTTCAATTAA 613
Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996
||||| || || ||||| ||| || ||||| || || || || |||| || |||||
Sbjct 612 ATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTA 553
Query 4997 CTGTTCGTCAGGCTTAAGTTT---TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTC 5053
||| ||| || | ||| | |||| | | ||||||||| ||||||||| |||
Sbjct 552 TCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTC 493
Query 5054 TTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTG 5113
|||| |||||||||| || ||||| ||||| ||||| | |||||| ||| ||||
Sbjct 492 TTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCT 433
Query 5114 AATCGGAAGTATGACAAATCT 5134
||| |||| || ||||||||
Sbjct 432 AATTGGAAACATAACAAATCT 412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427036432192490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |