Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq918 567 1e-156
seq2332 313 4e-80
>seq918
Length=18345
Score = 567 bits (628), Expect = 1e-156
Identities = 1520/2291 (66%), Gaps = 51/2291 (2%)
Strand=Plus/Plus
Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427
||||| | || || ||||| | || || || | || || | || ||||||||| ||
Sbjct 8841 TTATCAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATCCCG 8900
Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487
|| || | ||| |||| |||||||||||||| || || | ||| | |||
Sbjct 8901 GTCTTCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGA 8960
Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547
|| ||||| ||||| | || ||| |||||| || || || |||||||||| |||
Sbjct 8961 TCTTTAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCTGCC 9020
Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607
|| | || || ||||||| ||||||||| | || || | | ||| || |||
Sbjct 9021 ATATCAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATCTCA 9080
Query 75608 TCTGGAAGATTTG-TATT--TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664
|||| | || | || |||||| || || || || ||||| || | || |
Sbjct 9081 GCTGGGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTAACT 9140
Query 75665 TCATCATTCCACAATTTTCTC-TCGGTTAAAACTCT-AAGGAGATGAGGATTAACAATTT 75722
| |||||||| ||| | || ||| |||| || ||| |||||||||||||
Sbjct 9141 GCTTCATTCCA-AATACCCAAATCAACCAAATCTCTTAATAAGAAT-GGATTAACAATTT 9198
Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782
| ||||| |||| | ||||||| | ||||| || ||||||||||| | | |||
Sbjct 9199 GGAATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATT 9258
Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842
|||| || || || ||||| | ||||||||||| |||||||| || || || | | ||
Sbjct 9259 CATTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAAT 9318
Query 75843 TTCTGAGACCATGTGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901
|||| | |||||| || || || | |||| || ||| ||||||||| | || | |
Sbjct 9319 TTCTTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATC-CCAATCCCATAATTCAGTT 9377
Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATAT 75961
||| || ||| | ||| ||||||| | || | ||| ||| || |||
Sbjct 9378 GGTTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAA 9437
Query 75962 GTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAA 76021
| ||| |||| || || | || |||| ||| | | || | ||| | | ||||
Sbjct 9438 GATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAA 9497
Query 76022 ATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGT 76081
|| ||||| || || | |||| | ||| ||||| || |||||| || |||| |
Sbjct 9498 ATAGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCT 9556
Query 76082 AAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140
|| | || |||||||| || | || || || || | |||| ||||||| | || |
Sbjct 9557 TAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCAT 9616
Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200
|||||| ||| |||||||||| || ||||| ||| ||| |||| |||||| | |||
Sbjct 9617 GTTGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATT 9676
Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-------AATTTTC--C 76251
| ||| | || | || | || ||| ||||| | ||| || |
Sbjct 9677 ACGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATC 9736
Query 76252 ATCTATCACAA-ACAT-AT--TAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT 76307
|||| | ||| | || || |||| || || || |||| |||||||| || || || |
Sbjct 9737 ATCTTTTTCAACAAATGATGGTAAG-GCAATTGAAGCTAAGTTACAAACAGCAACTTCTT 9795
Query 76308 TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGAT 76367
|| | ||||| | || || |||| ||| | || ||| | || | ||
Sbjct 9796 CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAAT 9855
Query 76368 TTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTT 76427
| | ||| ||| |||||| |||||| | || ||||| | | ||| ||||| |||||||
Sbjct 9856 TCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTT 9915
Query 76428 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT- 76486
|| | || | ||| | || || | ||| | | || || || | ||||| |
Sbjct 9916 CAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAAT----GGTTTGTCTA 9971
Query 76487 ---CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543
|| || | |||||||| | |||||| ||||||||||||| || ||||||||
Sbjct 9972 CCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAACATCA 10031
Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603
|| |||||| |||||| || | | |||| ||| ||||||| || | || |
Sbjct 10032 GGTAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACTCTC 10091
Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663
|||||||| | |||||| ||||||| || |||| ||||| || |||| ||||||
Sbjct 10092 TTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCT 10151
Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723
|| ||| ||| ||| ||| ||| | || || | |||||| |||||||||||||||| |
Sbjct 10152 TTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAA 10211
Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783
|| | || | | || |||| |||||||| || ||||| | ||| | ||| ||||||
Sbjct 10212 TAAAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGTGTTA 10271
Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843
|| |||| | | ||| || ||||| ||||| || ||||| || || || | ||||||
Sbjct 10272 TTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAATATAT 10331
Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903
||| | |||||||||| |||| || || || || || || | || || ||
Sbjct 10332 GCCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATC 10391
Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963
| |||||| |||||| || |||||||| || || || |||||| |||| ||
Sbjct 10392 AAAGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAGCAACT 10451
Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023
| ||||| ||||||||| || ||| || |||||||| || || || || ||
Sbjct 10452 AAGAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTGAACCA 10511
Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083
|||||||| | |||| || | | ||| || | |||||||||| |||| |||
Sbjct 10512 TGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAGGGATAT--CAT 10569
Query 77084 T--GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141
| |||||| || | || || | ||| | | ||| || |||| ||| || |||
Sbjct 10570 TACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTAC 10629
Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 77199
||| | | | || || || ||| |||||||||| || || || ||||| || || |||
Sbjct 10630 CATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATAGTTGA 10689
Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC 77259
|| || | || |||| ||| | ||||||| || || || || || |||||
Sbjct 10690 AA--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT- 10746
Query 77260 CATGACAGT-GGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAA 77318
||| | | | ||||| || ||||| || | | | || || |||||||| | |
Sbjct 10747 CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCAT 10806
Query 77319 ATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGG 77378
|||| |||| | || | | || |||| | |||| || |||| ||| |||||||
Sbjct 10807 ATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGATACGG 10866
Query 77379 CTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATT 77437
| ||||||||||||| ||| ||||| || ||||| || || || || ||| || ||
Sbjct 10867 CAATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAGCAGTT 10925
Query 77438 TCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAAT--AA 77495
|| || ||||| |||||||||| | || ||||| || | ||| | ||| |||
Sbjct 10926 TCAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCTGAAATGGTT 10985
Query 77496 CTTTCATGGCTATTTTGATAGGATCTACA-AACTCGGTGTTCAAACCATAACATAATTTT 77554
|||| | | || || | ||| ||| | |||| | || || ||||||||| ||
Sbjct 10986 CTTTGA--GTGATGGCGACGGCATCAACATGATTCGG-ATCTAATCCGTAACATAATCTT 11042
Query 77555 CTAATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCATTTCGTTTAATG 77614
|| | || ||||||||||| || ||||| ||||||| |||| || ||||
Sbjct 11043 TGAACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTCTTTTATAA 11102
Query 77615 ACGAACATCGT 77625
||| |||||||
Sbjct 11103 ACGTACATCGT 11113
>seq2332
Length=8947
Score = 313 bits (346), Expect = 4e-80
Identities = 625/929 (67%), Gaps = 30/929 (3%)
Strand=Plus/Minus
Query 46326 CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 46385
|||||| || ||||| || ||| || | || || ||||| |||||||| || |
Sbjct 1329 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 1270
Query 46386 CAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCC 46445
||||| |||||||||||||||||||| ||||| ||||||||| | ||| ||| ||
Sbjct 1269 TAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACC 1210
Query 46446 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATT 46505
||| | | | |||||| ||||| ||||| | ||| ||||| || || ||
Sbjct 1209 AAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTT 1150
Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565
||| |||| | | || |||| || || || | | | || | ||||||| || ||
Sbjct 1149 CATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGC 1090
Query 46566 ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625
|| || ||| | || |||| | |||| || | ||||| ||| |
Sbjct 1089 TTCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATGAGCAAATAA 1030
Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685
|||||| ||||||||| ||| | ||||||||||||| ||||||||| || ||||| ||
Sbjct 1029 TAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGT 970
Query 46686 GAGCCCAGGCATTAG--------------------TCCA--CGCTTTT--TGAGCCAAAA 46721
| || ||||| || | | ||||| | | ||| ||
Sbjct 969 TAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAA 910
Query 46722 TATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCT 46781
|||| || || |||||| |||||| || ||||| || || || || || || | |||
Sbjct 909 AATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCT 850
Query 46782 CTCTCCGTAACTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTT 46838
|| | || | | ||| ||| | ||||| ||| ||||||||||| ||| | |
Sbjct 849 TTCAGCATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCT 790
Query 46839 TACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAAC 46898
| ||| || || ||| ||||||||||| | | | ||| | ||| ||||
Sbjct 789 AATACATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAAT 730
Query 46899 ATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAA 46958
||| ||||| |||||||| ||| ||||||||||||| |||||||| || || ||
Sbjct 729 ATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAA 670
Query 46959 TCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATT 47018
|| ||||| || | ||||||| ||| || || |||| |||| |||| |||||
Sbjct 669 ACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATT 610
Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTT 47078
||||| || || |||||| |||||||| ||||| ||||| | ||| || ||| |
Sbjct 609 TTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCT 550
Query 47079 TTCATCGGTAGTCAGTTTAT---TCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135
|||||| | | | ||||| |||| |||| | |||||| || ||| | ||||||
Sbjct 549 TTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTC 490
Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGAT 47195
||| ||||| ||||| || |||||||| || || | | ||| || ||| ||||| ||
Sbjct 489 AGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAAT 430
Query 47196 CGGAAAAATAACAAATCTATTTGGATTTT 47224
||||| |||||||||||| |||||||
Sbjct 429 TGGAAACATAACAAATCTACGAGGATTTT 401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712911853449600
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