Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq918 567 1e-156 seq2332 313 4e-80 >seq918 Length=18345 Score = 567 bits (628), Expect = 1e-156 Identities = 1520/2291 (66%), Gaps = 51/2291 (2%) Strand=Plus/Plus Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427 ||||| | || || ||||| | || || || | || || | || ||||||||| || Sbjct 8841 TTATCAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATCCCG 8900 Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487 || || | ||| |||| |||||||||||||| || || | ||| | ||| Sbjct 8901 GTCTTCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGA 8960 Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547 || ||||| ||||| | || ||| |||||| || || || |||||||||| ||| Sbjct 8961 TCTTTAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCTGCC 9020 Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607 || | || || ||||||| ||||||||| | || || | | ||| || ||| Sbjct 9021 ATATCAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATCTCA 9080 Query 75608 TCTGGAAGATTTG-TATT--TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664 |||| | || | || |||||| || || || || ||||| || | || | Sbjct 9081 GCTGGGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTAACT 9140 Query 75665 TCATCATTCCACAATTTTCTC-TCGGTTAAAACTCT-AAGGAGATGAGGATTAACAATTT 75722 | |||||||| ||| | || ||| |||| || ||| ||||||||||||| Sbjct 9141 GCTTCATTCCA-AATACCCAAATCAACCAAATCTCTTAATAAGAAT-GGATTAACAATTT 9198 Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782 | ||||| |||| | ||||||| | ||||| || ||||||||||| | | ||| Sbjct 9199 GGAATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATT 9258 Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842 |||| || || || ||||| | ||||||||||| |||||||| || || || | | || Sbjct 9259 CATTATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAAT 9318 Query 75843 TTCTGAGACCATGTGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901 |||| | |||||| || || || | |||| || ||| ||||||||| | || | | Sbjct 9319 TTCTTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATC-CCAATCCCATAATTCAGTT 9377 Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATAT 75961 ||| || ||| | ||| ||||||| | || | ||| ||| || ||| Sbjct 9378 GGTTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAA 9437 Query 75962 GTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAA 76021 | ||| |||| || || | || |||| ||| | | || | ||| | | |||| Sbjct 9438 GATTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAA 9497 Query 76022 ATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGT 76081 || ||||| || || | |||| | ||| ||||| || |||||| || |||| | Sbjct 9498 ATAGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCT 9556 Query 76082 AAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 || | || |||||||| || | || || || || | |||| ||||||| | || | Sbjct 9557 TAATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCAT 9616 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 |||||| ||| |||||||||| || ||||| ||| ||| |||| |||||| | ||| Sbjct 9617 GTTGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATT 9676 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-------AATTTTC--C 76251 | ||| | || | || | || ||| ||||| | ||| || | Sbjct 9677 ACGAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATC 9736 Query 76252 ATCTATCACAA-ACAT-AT--TAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT 76307 |||| | ||| | || || |||| || || || |||| |||||||| || || || | Sbjct 9737 ATCTTTTTCAACAAATGATGGTAAG-GCAATTGAAGCTAAGTTACAAACAGCAACTTCTT 9795 Query 76308 TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGAT 76367 || | ||||| | || || |||| ||| | || ||| | || | || Sbjct 9796 CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAAT 9855 Query 76368 TTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTT 76427 | | ||| ||| |||||| |||||| | || ||||| | | ||| ||||| ||||||| Sbjct 9856 TCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTT 9915 Query 76428 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT- 76486 || | || | ||| | || || | ||| | | || || || | ||||| | Sbjct 9916 CAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAAT----GGTTTGTCTA 9971 Query 76487 ---CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 || || | |||||||| | |||||| ||||||||||||| || |||||||| Sbjct 9972 CCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAACATCA 10031 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 || |||||| |||||| || | | |||| ||| ||||||| || | || | Sbjct 10032 GGTAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACTCTC 10091 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 |||||||| | |||||| ||||||| || |||| ||||| || |||| |||||| Sbjct 10092 TTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCT 10151 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || ||| ||| ||| ||| ||| | || || | |||||| |||||||||||||||| | Sbjct 10152 TTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAA 10211 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || | || | | || |||| |||||||| || ||||| | ||| | ||| |||||| Sbjct 10212 TAAAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGTGTTA 10271 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || |||| | | ||| || ||||| ||||| || ||||| || || || | |||||| Sbjct 10272 TTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAATATAT 10331 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 ||| | |||||||||| |||| || || || || || || | || || || Sbjct 10332 GCCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATC 10391 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | |||||| |||||| || |||||||| || || || |||||| |||| || Sbjct 10392 AAAGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAGCAACT 10451 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 | ||||| ||||||||| || ||| || |||||||| || || || || || Sbjct 10452 AAGAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTGAACCA 10511 Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083 |||||||| | |||| || | | ||| || | |||||||||| |||| ||| Sbjct 10512 TGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAGGGATAT--CAT 10569 Query 77084 T--GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141 | |||||| || | || || | ||| | | ||| || |||| ||| || ||| Sbjct 10570 TACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTAC 10629 Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 77199 ||| | | | || || || ||| |||||||||| || || || ||||| || || ||| Sbjct 10630 CATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATAGTTGA 10689 Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC 77259 || || | || |||| ||| | ||||||| || || || || || ||||| Sbjct 10690 AA--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT- 10746 Query 77260 CATGACAGT-GGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAA 77318 ||| | | | ||||| || ||||| || | | | || || |||||||| | | Sbjct 10747 CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCAT 10806 Query 77319 ATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGG 77378 |||| |||| | || | | || |||| | |||| || |||| ||| ||||||| Sbjct 10807 ATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGATACGG 10866 Query 77379 CTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATT 77437 | ||||||||||||| ||| ||||| || ||||| || || || || ||| || || Sbjct 10867 CAATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAGCAGTT 10925 Query 77438 TCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAAT--AA 77495 || || ||||| |||||||||| | || ||||| || | ||| | ||| ||| Sbjct 10926 TCAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCTGAAATGGTT 10985 Query 77496 CTTTCATGGCTATTTTGATAGGATCTACA-AACTCGGTGTTCAAACCATAACATAATTTT 77554 |||| | | || || | ||| ||| | |||| | || || ||||||||| || Sbjct 10986 CTTTGA--GTGATGGCGACGGCATCAACATGATTCGG-ATCTAATCCGTAACATAATCTT 11042 Query 77555 CTAATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCATTTCGTTTAATG 77614 || | || ||||||||||| || ||||| ||||||| |||| || |||| Sbjct 11043 TGAACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTCTTTTATAA 11102 Query 77615 ACGAACATCGT 77625 ||| ||||||| Sbjct 11103 ACGTACATCGT 11113 >seq2332 Length=8947 Score = 313 bits (346), Expect = 4e-80 Identities = 625/929 (67%), Gaps = 30/929 (3%) Strand=Plus/Minus Query 46326 CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 46385 |||||| || ||||| || ||| || | || || ||||| |||||||| || | Sbjct 1329 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 1270 Query 46386 CAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCC 46445 ||||| |||||||||||||||||||| ||||| ||||||||| | ||| ||| || Sbjct 1269 TAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACC 1210 Query 46446 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATT 46505 ||| | | | |||||| ||||| ||||| | ||| ||||| || || || Sbjct 1209 AAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTT 1150 Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565 ||| |||| | | || |||| || || || | | | || | ||||||| || || Sbjct 1149 CATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGC 1090 Query 46566 ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625 || || ||| | || |||| | |||| || | ||||| ||| | Sbjct 1089 TTCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATGAGCAAATAA 1030 Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685 |||||| ||||||||| ||| | ||||||||||||| ||||||||| || ||||| || Sbjct 1029 TAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGT 970 Query 46686 GAGCCCAGGCATTAG--------------------TCCA--CGCTTTT--TGAGCCAAAA 46721 | || ||||| || | | ||||| | | ||| || Sbjct 969 TAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAA 910 Query 46722 TATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCT 46781 |||| || || |||||| |||||| || ||||| || || || || || || | ||| Sbjct 909 AATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCT 850 Query 46782 CTCTCCGTAACTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTT 46838 || | || | | ||| ||| | ||||| ||| ||||||||||| ||| | | Sbjct 849 TTCAGCATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCT 790 Query 46839 TACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAAC 46898 | ||| || || ||| ||||||||||| | | | ||| | ||| |||| Sbjct 789 AATACATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAAT 730 Query 46899 ATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAA 46958 ||| ||||| |||||||| ||| ||||||||||||| |||||||| || || || Sbjct 729 ATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAA 670 Query 46959 TCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATT 47018 || ||||| || | ||||||| ||| || || |||| |||| |||| ||||| Sbjct 669 ACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATT 610 Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTT 47078 ||||| || || |||||| |||||||| ||||| ||||| | ||| || ||| | Sbjct 609 TTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCT 550 Query 47079 TTCATCGGTAGTCAGTTTAT---TCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135 |||||| | | | ||||| |||| |||| | |||||| || ||| | |||||| Sbjct 549 TTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTC 490 Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGAT 47195 ||| ||||| ||||| || |||||||| || || | | ||| || ||| ||||| || Sbjct 489 AGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAAT 430 Query 47196 CGGAAAAATAACAAATCTATTTGGATTTT 47224 ||||| |||||||||||| ||||||| Sbjct 429 TGGAAACATAACAAATCTACGAGGATTTT 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712911853449600