Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2023 113 1e-19 seq2193 102 2e-16 >seq2023 Length=11923 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| || |||||||||||||| || | ||||||||| |||||||||| || || Sbjct 4110 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 4051 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | || || ||||| | | || |||||||| ||||| || || |||| Sbjct 4050 GCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGATTTG 3991 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| ||| || ||||| | |||||||| || || || | ||| Sbjct 3990 ACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGGTC 3931 Query 152088 TTCACGAAGACCTGCATTTT 152107 || ||||| | |||||||| Sbjct 3930 TTGACGAAAATTTGCATTTT 3911 >seq2193 Length=52601 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | |||||| || ||||||||||||||||||| ||||||||| || Sbjct 25269 TCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGATAAAGTTCTACC 25210 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || ||||| || | | || || || | | || |||||||| Sbjct 25209 GTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTT 25150 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| |||||| | || | |||| ||| || ||||| | ||||| Sbjct 25149 GTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAAT 25090 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||||| ||||| | ||||| Sbjct 25089 GGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153783398177630