Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2023 168 1e-36
seq2193 165 2e-35
>seq2023
Length=11923
Score = 168 bits (186), Expect = 1e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956
||||| || ||| ||||||||||||||||||| | || | ||||| |||| |||
Sbjct 4116 TGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGC 4057
Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016
|| || |||||||| || | |||||||||| |||||||| |||||||||||||||||
Sbjct 4056 TTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 3997
Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076
| ||| || | || |||||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 3996 GATTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTT 3937
Query 283077 AAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||| ||||| || ||||||||
Sbjct 3936 AAGGTCTTGACGAAAATTTGCATTTT 3911
>seq2193
Length=52601
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| ||| ||| ||||| ||||||||||||| | || | || || |||| |||
Sbjct 25029 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCTTCTAATTG 24970
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || || || |||||||||||||| || |||||||| ||||||||||| || ||
Sbjct 24969 CTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTT 24910
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| ||| ||| ||||||| ||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 24909 AGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 24850
Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| || |||||
Sbjct 24849 TAAGGTCTTGACGAAAATTTGCAT 24826
Score = 145 bits (160), Expect = 2e-29
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| ||| ||| ||||| ||||||||||| | | || | || || || | |||
Sbjct 24801 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCGTCTTCCAATTG 24742
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||| |||||||||||||| || |||||||| ||||| |||||||| ||
Sbjct 24741 CTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTT 24682
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| || || | || |||||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 24681 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGT 24622
Query 283076 CAAAGTCTTAACGAATATCTGCATT 283100
|||||||| ||||| || ||||||
Sbjct 24621 TAAAGTCTTGACGAAGATTTGCATT 24597
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| || ||| |||||||||||||| || | | || | || || || | |||
Sbjct 25257 ATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGATAAAGTTCTACCGTCTTCCAATTG 25198
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || || || |||||||||||||| || |||||||| |||||||||||||| ||
Sbjct 25197 CTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGGATTTT 25138
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
| || || | || |||||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 25137 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGT 25078
Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| || |||||
Sbjct 25077 TAAGGTCTTGACGAAAATTTGCAT 25054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046705269294620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |