Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 340 2e-88
>seq2332
Length=8947
Score = 340 bits (376), Expect = 2e-88
Identities = 628/923 (68%), Gaps = 35/923 (4%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| |||||||| || ||| | |||| ||||| || || ||||| |
Sbjct 1329 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGC 1270
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
|||||| |||||||||||||||||||||||||| | |||||| || |||
Sbjct 1269 TAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACC 1210
Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384
||| | ||| | ||||| || |||||||||| ||||||||||||||| | | |||
Sbjct 1209 AAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTT 1150
Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444
||||||| || | ||||| | |||||| || || |||||||| ||| ||
Sbjct 1149 CATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGC 1090
Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504
|| ||| || | | | || |||| | ||| || ||||||| ||| ||
Sbjct 1089 TTCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATGAGCAAATAA 1030
Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564
|||||| ||||||||| ||||| |||||||| |||| ||| |||||||| ||||| ||
Sbjct 1029 TAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGT 970
Query 23565 TAATCCTGGCATT------------------------AATCCTCGTTTTTTAATCCAAAA 23600
||| |||||||| || |||| ||| || | ||| ||
Sbjct 969 TAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAA 910
Query 23601 TATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACG 23660
|| | ||||||||||| |||||||||||| ||||| || |||||||| || | |
Sbjct 909 AATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCT 850
Query 23661 TGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTT 23720
| | || || | | | ||||| ||||||| || || ||||| ||| || | |
Sbjct 849 TTCAGCATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCT 790
Query 23721 TACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGT 23777
| ||| ||| |||||| || || || | || | |||| || ||| |
Sbjct 789 AATACATGGAATATGTTCAATAGCATTAAATAAGTAA---TCAGCTTCCTTTGGATCCTT 733
Query 23778 TATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTG 23837
||||| |||||||||| | ||| |||| ||||||||||||||||| ||| ||
Sbjct 732 AATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTG 673
Query 23838 AAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCAT-TAAAAAATCTTTTAGCTA 23896
|| |||||||| || ||||||||| | |||||| || | |||||| ||| | ||
Sbjct 672 GAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAAT-TTTCAATTA 614
Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956
||||||| ||||||||||||||| ||||||||||| || | || || || |
Sbjct 613 AATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGT 554
Query 23957 GTCTTTCATCAGTTGATAATTT---TTTCCAATCATTAATATCTTTTGATAAATCAACTT 24013
|||||||||| |||||| | ||||||||| | |||||| |||||||| ||
Sbjct 553 ATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTT 494
Query 24014 CATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTT 24073
| ||| | |||||||| ||| || ||| || | | ||||||| |||| || |
Sbjct 493 CTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATC 434
Query 24074 GTATTGGAAATATTACGAATCTA 24096
|||||||| || || ||||||
Sbjct 433 TAATTGGAAACATAACAAATCTA 411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521471507942000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |